More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A0478 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008825  Mpe_A0478  two-component response regulator  100 
 
 		 215 aa  423  1e-117  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.0760202 
 
 
-
 
NC_008781  Pnap_3597  two component LuxR family transcriptional regulator  48.13 
 
 		 214 aa  182  3e-45  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  45.15 
 
 		 218 aa  173  9.999999999999999e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  46.41 
 
 		 205 aa  171  9e-42  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  43.19 
 
 		 215 aa  166  4e-40  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_007347  Reut_A1785  two component LuxR family transcriptional regulator  44.71 
 
 		 206 aa  165  4e-40  Ralstonia eutropha JMP134  Bacteria  normal  0.762084  n/a   
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  44.08 
 
 		 210 aa  165  4e-40  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  41.75 
 
 		 220 aa  163  2.0000000000000002e-39  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  43.69 
 
 		 220 aa  160  1e-38  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  40.87 
 
 		 221 aa  156  2e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  39.52 
 
 		 210 aa  150  1e-35  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  39.05 
 
 		 210 aa  150  2e-35  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  38.1 
 
 		 210 aa  150  2e-35  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  39.05 
 
 		 210 aa  148  6e-35  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  38.57 
 
 		 210 aa  148  6e-35  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  39.42 
 
 		 210 aa  148  6e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  40.19 
 
 		 209 aa  148  7e-35  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  39.05 
 
 		 210 aa  147  9e-35  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  39.51 
 
 		 223 aa  147  1.0000000000000001e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  36.67 
 
 		 210 aa  146  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  36.71 
 
 		 208 aa  145  5e-34  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  36.67 
 
 		 210 aa  144  7.0000000000000006e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_011894  Mnod_7263  two component transcriptional regulator, LuxR family  43.75 
 
 		 219 aa  142  3e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  36.67 
 
 		 210 aa  142  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  38.76 
 
 		 235 aa  140  9.999999999999999e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  39.81 
 
 		 216 aa  139  3e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  36.67 
 
 		 213 aa  138  6e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  35.71 
 
 		 212 aa  138  6e-32  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_010510  Mrad2831_5893  two component LuxR family transcriptional regulator  41.55 
 
 		 219 aa  136  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.125381 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  38.25 
 
 		 224 aa  136  2e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  33.8 
 
 		 236 aa  135  3.0000000000000003e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  38.57 
 
 		 216 aa  135  5e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_009485  BBta_5350  two-component response regulator  40.18 
 
 		 215 aa  135  7.000000000000001e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0125403 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  33.49 
 
 		 239 aa  135  7.000000000000001e-31  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  34.29 
 
 		 214 aa  134  8e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  37.38 
 
 		 214 aa  134  9.999999999999999e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  36.84 
 
 		 209 aa  134  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  36.67 
 
 		 212 aa  134  9.999999999999999e-31  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_011662  Tmz1t_0180  two component transcriptional regulator, LuxR family  39.42 
 
 		 213 aa  132  3e-30  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3850  two component LuxR family transcriptional regulator  40.57 
 
 		 224 aa  132  3e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  37.85 
 
 		 244 aa  132  3e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.39 
 
 		 226 aa  132  3.9999999999999996e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  33.81 
 
 		 210 aa  132  5e-30  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  34.42 
 
 		 215 aa  131  9e-30  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  39.52 
 
 		 215 aa  131  9e-30  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  39.52 
 
 		 215 aa  131  9e-30  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  39.52 
 
 		 215 aa  131  9e-30  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_3594  two component transcriptional regulator, LuxR family  43.33 
 
 		 219 aa  130  1.0000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.35213  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.83 
 
 		 216 aa  131  1.0000000000000001e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3468  two component transcriptional regulator, LuxR family  44.17 
 
 		 219 aa  130  1.0000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  34.47 
 
 		 210 aa  129  2.0000000000000002e-29  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  34.47 
 
 		 210 aa  129  2.0000000000000002e-29  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  36.23 
 
 		 206 aa  129  3e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  37.62 
 
 		 218 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.91 
 
 		 213 aa  129  3e-29  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  34.88 
 
 		 219 aa  129  3e-29  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  35.71 
 
 		 210 aa  129  3e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  34.29 
 
 		 210 aa  129  4.0000000000000003e-29  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  36.19 
 
 		 213 aa  129  4.0000000000000003e-29  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  37.07 
 
 		 229 aa  128  6e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  36.15 
 
 		 214 aa  128  8.000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_012912  Dd1591_1895  two component transcriptional regulator, LuxR family  34.93 
 
 		 213 aa  128  8.000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  33.33 
 
 		 215 aa  127  1.0000000000000001e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  33.97 
 
 		 209 aa  126  2.0000000000000002e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  34.93 
 
 		 212 aa  126  2.0000000000000002e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  33.97 
 
 		 209 aa  126  2.0000000000000002e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  35.89 
 
 		 210 aa  127  2.0000000000000002e-28  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  33.97 
 
 		 209 aa  126  2.0000000000000002e-28  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  32.86 
 
 		 210 aa  126  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.96 
 
 		 217 aa  127  2.0000000000000002e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008786  Veis_3303  two component LuxR family transcriptional regulator  35.24 
 
 		 222 aa  127  2.0000000000000002e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.248413 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  36.06 
 
 		 209 aa  126  2.0000000000000002e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_008825  Mpe_A3043  LuxR family DNA binding response regulator  38.03 
 
 		 209 aa  126  2.0000000000000002e-28  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  32.38 
 
 		 210 aa  126  3e-28  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  40 
 
 		 208 aa  126  3e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.96 
 
 		 224 aa  126  3e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  35.35 
 
 		 221 aa  126  3e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_003910  CPS_3271  response regulator  30.48 
 
 		 214 aa  125  4.0000000000000003e-28  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  37.73 
 
 		 230 aa  125  4.0000000000000003e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  35.71 
 
 		 218 aa  125  6e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_009092  Shew_1824  response regulator  32.51 
 
 		 229 aa  125  6e-28  Shewanella loihica PV-4  Bacteria  normal  0.152948  normal  1 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  38.1 
 
 		 215 aa  125  6e-28  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_010172  Mext_3270  response regulator receiver  42.11 
 
 		 220 aa  125  7e-28  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.336161 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.7 
 
 		 219 aa  125  7e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  35.92 
 
 		 219 aa  124  7e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  37.8 
 
 		 209 aa  124  8.000000000000001e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  36.19 
 
 		 217 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  36.84 
 
 		 209 aa  124  1e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.02 
 
 		 216 aa  124  1e-27  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  33.65 
 
 		 213 aa  124  1e-27  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  36.19 
 
 		 211 aa  124  1e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_008825  Mpe_A2603  two component LuxR family transcriptional regulator  41.71 
 
 		 222 aa  124  1e-27  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  32.69 
 
 		 208 aa  123  2e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  34.93 
 
 		 210 aa  123  2e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1607  response regulator  31.43 
 
 		 214 aa  123  2e-27  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00000106395  normal  1 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  35.1 
 
 		 210 aa  122  3e-27  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I2141  response regulator  29.05 
 
 		 214 aa  122  3e-27  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  36.84 
 
 		 215 aa  122  3e-27  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2150  response regulator  33.17 
 
 		 216 aa  122  3e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0590135  normal  1 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  37.04 
 
 		 225 aa  122  4e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
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