More than 300 homologs were found in PanDaTox collection
for query gene Rfer_1873 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  100 
 
 		 219 aa  446  1.0000000000000001e-124  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  71.9 
 
 		 212 aa  314  8e-85  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  67.46 
 
 		 210 aa  296  2e-79  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  67.46 
 
 		 210 aa  295  4e-79  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  67.46 
 
 		 210 aa  294  6e-79  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  66.19 
 
 		 239 aa  291  5e-78  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  66.99 
 
 		 210 aa  291  5e-78  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  66.51 
 
 		 210 aa  290  9e-78  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  66.51 
 
 		 210 aa  288  6e-77  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  65.07 
 
 		 210 aa  287  1e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  56.67 
 
 		 210 aa  258  6e-68  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  57.14 
 
 		 210 aa  258  7e-68  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  56.67 
 
 		 210 aa  256  2e-67  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  54.76 
 
 		 210 aa  249  3e-65  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  53.81 
 
 		 210 aa  242  3e-63  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  55.61 
 
 		 210 aa  238  4e-62  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  55.61 
 
 		 210 aa  238  4e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  54.55 
 
 		 210 aa  236  1e-61  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  54.55 
 
 		 210 aa  236  1e-61  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  53.46 
 
 		 236 aa  233  1.0000000000000001e-60  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  53.59 
 
 		 211 aa  226  1e-58  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_0474  two component transcriptional regulator, LuxR family  55.5 
 
 		 211 aa  214  5.9999999999999996e-55  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  46.19 
 
 		 215 aa  194  6e-49  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  46.86 
 
 		 208 aa  194  1e-48  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_2180  two component LuxR family transcriptional regulator  45.45 
 
 		 209 aa  191  9e-48  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.876214 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  43.75 
 
 		 211 aa  186  3e-46  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007951  Bxe_A4347  two component LuxR family transcriptional regulator  46.15 
 
 		 218 aa  186  3e-46  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.705126 
 
 
-
 
NC_008825  Mpe_A3494  two component LuxR family transcriptional regulator  43.56 
 
 		 226 aa  185  6e-46  Methylibium petroleiphilum PM1  Bacteria  normal  0.514045  normal  1 
 
 
-
 
NC_010002  Daci_0651  two component LuxR family transcriptional regulator  43.06 
 
 		 209 aa  184  1.0000000000000001e-45  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.713834 
 
 
-
 
NC_010681  Bphyt_0374  two component transcriptional regulator, LuxR family  45.67 
 
 		 218 aa  183  2.0000000000000003e-45  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  44.98 
 
 		 210 aa  183  2.0000000000000003e-45  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  43.06 
 
 		 209 aa  183  2.0000000000000003e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  41.63 
 
 		 209 aa  182  3e-45  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  45.19 
 
 		 218 aa  182  3e-45  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  41.63 
 
 		 209 aa  182  3e-45  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  44.02 
 
 		 209 aa  182  4.0000000000000006e-45  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  44.98 
 
 		 210 aa  182  5.0000000000000004e-45  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_0097  two component LuxR family transcriptional regulator  45.67 
 
 		 218 aa  181  1e-44  Burkholderia phymatum STM815  Bacteria  normal  0.605108  normal  1 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  45.89 
 
 		 215 aa  180  2e-44  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  43.27 
 
 		 210 aa  179  2.9999999999999997e-44  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  46.19 
 
 		 210 aa  179  2.9999999999999997e-44  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  44.71 
 
 		 218 aa  179  2.9999999999999997e-44  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  42.11 
 
 		 209 aa  179  4e-44  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  44.71 
 
 		 455 aa  178  7e-44  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_3481  two component LuxR family transcriptional regulator  46.45 
 
 		 212 aa  177  8e-44  Pelobacter propionicus DSM 2379  Bacteria  normal  0.016753  n/a   
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  43.75 
 
 		 271 aa  176  3e-43  Burkholderia sp. 383  Bacteria  normal  1  normal  0.285313 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  39.61 
 
 		 210 aa  175  4e-43  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_010508  Bcenmc03_3074  two component LuxR family transcriptional regulator  43.27 
 
 		 218 aa  174  9.999999999999999e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_2441  two component LuxR family transcriptional regulator  43.27 
 
 		 218 aa  174  9.999999999999999e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_3055  two component LuxR family transcriptional regulator  43.27 
 
 		 218 aa  174  9.999999999999999e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  0.327843  n/a   
 
 
-
 
NC_010084  Bmul_3052  two component LuxR family transcriptional regulator  42.79 
 
 		 218 aa  172  2.9999999999999996e-42  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317078  normal  1 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  45.28 
 
 		 210 aa  172  2.9999999999999996e-42  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  43.54 
 
 		 214 aa  171  6.999999999999999e-42  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  42.79 
 
 		 218 aa  171  9e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.288922 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  43.2 
 
 		 218 aa  171  1e-41  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  44.5 
 
 		 210 aa  170  2e-41  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  43.06 
 
 		 210 aa  170  2e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  41.15 
 
 		 215 aa  169  4e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  40.95 
 
 		 214 aa  168  6e-41  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_012912  Dd1591_1895  two component transcriptional regulator, LuxR family  41.78 
 
 		 213 aa  166  2e-40  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  42.65 
 
 		 212 aa  166  4e-40  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  41.63 
 
 		 235 aa  165  5e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  39.52 
 
 		 215 aa  164  8e-40  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  41.35 
 
 		 215 aa  164  1.0000000000000001e-39  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  162  3e-39  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  45.67 
 
 		 213 aa  162  3e-39  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  39.71 
 
 		 215 aa  162  4.0000000000000004e-39  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  40.58 
 
 		 216 aa  161  7e-39  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_012917  PC1_2669  response regulator  39.52 
 
 		 218 aa  161  8.000000000000001e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000700042  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  40.28 
 
 		 214 aa  160  1e-38  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  38.28 
 
 		 215 aa  160  1e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1290  two component LuxR family transcriptional regulator  43.33 
 
 		 209 aa  160  1e-38  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.542915  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  38.28 
 
 		 215 aa  160  1e-38  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  38.28 
 
 		 215 aa  160  1e-38  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1594  response regulator  39.71 
 
 		 218 aa  160  2e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  0.518893  n/a   
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  159  3e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  44.71 
 
 		 214 aa  159  3e-38  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  159  3e-38  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  159  4e-38  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_012880  Dd703_1450  response regulator  38.39 
 
 		 218 aa  158  7e-38  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  40.38 
 
 		 214 aa  158  7e-38  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  38.76 
 
 		 215 aa  157  8e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  157  8e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  157  9e-38  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  38.76 
 
 		 215 aa  157  9e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_004578  PSPTO_0560  DNA-binding response regulator, LuxR family  40.67 
 
 		 209 aa  156  2e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  156  2e-37  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  39.23 
 
 		 216 aa  157  2e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  38.76 
 
 		 216 aa  156  3e-37  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  39.42 
 
 		 215 aa  155  4e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  155  5.0000000000000005e-37  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  155  5.0000000000000005e-37  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  155  5.0000000000000005e-37  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  38.76 
 
 		 215 aa  155  5.0000000000000005e-37  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  40 
 
 		 214 aa  155  5.0000000000000005e-37  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
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