| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1873 |
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| Symbol | |
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| ID | 3960847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2012505 |
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| End bp | 2013164 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637916693 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_523130 |
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| Protein GI | 89900659 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAA AAATGCTGCC AAACACCATG ATTCGAATTG CCATTGTTGA CGACCATGCG
ATGGTCCGCG CCGGATTGCG CCAATTTTTT TCCGACCAGA TCGACTTCGC CGTGGTCGCC
GAAGCAGCCA ATGGCCGAGG GGCGCTTGAC ATCGTGCGCA AAGGCGAGGT CGACGTGATC
CTGCTCGACA TCTCCATGCC GGACCAAAGC GGTGTTGATG CACTGATCGC CATCCGGGCC
CGTGCACCCG ATTTGCCGGT ACTGATTTTG AGTGGCTTTG CGGAAGAACA TTACGCCACC
ACCTTGCTGC GCCAAGGTGC CAGTGGCTAC CTGAACAAAG ACTGCGACCC GGAAGAAATT
GTCAAAGCGA TCCGCACGGT GCATCGCGGG CGCAAGTACA TCACGGCAGG TGTTGCCGAG
CTTCTGGCGG ACGGTTTGAG CGGGGGAACC GATAAGCCGC TTCATGAGAA TCTGTCGGAG
CGTGAGTTAC AGGTTTTTTT GCGTCTGGCC AAGGGAGAGG CCATCGGCCA CATGGCGGTC
AGTATGTCGC TGAGCGTCAA GACGGTCAGC ACCTACCGAA CCCGGGTGAT GGAAAAAATG
AAACTCGAAA CAAACAGCGA CCTGACCTAT TACGCGTTGA AAAGCGGCTT GATCCAATAG
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| Protein sequence | MQQKMLPNTM IRIAIVDDHA MVRAGLRQFF SDQIDFAVVA EAANGRGALD IVRKGEVDVI
LLDISMPDQS GVDALIAIRA RAPDLPVLIL SGFAEEHYAT TLLRQGASGY LNKDCDPEEI
VKAIRTVHRG RKYITAGVAE LLADGLSGGT DKPLHENLSE RELQVFLRLA KGEAIGHMAV
SMSLSVKTVS TYRTRVMEKM KLETNSDLTY YALKSGLIQ
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