| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0292 |
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| Symbol | vsrD |
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| ID | 1219095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 324173 |
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| End bp | 324805 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637236649 |
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| Product | response regulator transcription regulator protein |
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| Protein accession | NP_518413 |
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| Protein GI | 17545011 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCGCG TCCTGATTGC GGACGACCAT GAAATCGTCC GCGCCGGTCT TCGGCAGTTC
CTGTCGGAAG AGCGGGACAT CGAAGTGGCG GGGGAGGCGG CCAGCGGGGA AGAGGTGATG
GAGCAACTGC GCACCGGAAC CTTCGACGTG GTGGTTCTGG ACATCTCCAT GCCCGACCGC
AACGGCATCG ACACGCTCAA GCTGGTACGG CAGCGTCACC CGGACCTGCC GGTGCTGATC
CTGTCCACCT TTCCGGAAGA CCAGTACGCG ATCAACCTGA TCCGGGCCGG CGCCTCGGGC
TACCTGACCA AGGAAAGCGC GCCGGACGAA CTCGTCAAGG CCATCCGCAC CGTCTCGCAA
GGGCGCCGTT ACGTGAGCCC GACGGTCGCC GAACTGCTGA TCGGCGGGCT GGAGAAGCCG
ACCGACCAGC CGCTGCACCA GACCCTGTCC AAGCGCGAAT TCCAGATCTT CTGCAAGCTG
GCGCGTGGCC AGTCGGTCTC GATCATCGCC GAAGAGTTGT TCCTGAGCGT CAAGACGGTC
AGCACGTACC GCACCCGCAT CCTGGAAAAG ATGGGCATGA AGTCGAACGC CGACCTGACG
TATTACGCCA TCAAGAACGG ACTGGTGGAA TGA
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| Protein sequence | MIRVLIADDH EIVRAGLRQF LSEERDIEVA GEAASGEEVM EQLRTGTFDV VVLDISMPDR
NGIDTLKLVR QRHPDLPVLI LSTFPEDQYA INLIRAGASG YLTKESAPDE LVKAIRTVSQ
GRRYVSPTVA ELLIGGLEKP TDQPLHQTLS KREFQIFCKL ARGQSVSIIA EELFLSVKTV
STYRTRILEK MGMKSNADLT YYAIKNGLVE
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