Gene Swoo_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2150 
Symbol 
ID6116415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2639143 
End bp2639793 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID641633655 
Productresponse regulator 
Protein accessionYP_001760529 
Protein GI170726503 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0590135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTCTG TATATTTAGT CGATGATCAT GAATTAGTTA GAACCGGAAT ACGGCGCCTT 
CTTGAAGATG AGCGTGGCAT TAAAGTCGTA GGTGAGGCTG GAGATGGAGA AACCGCTGTT
CAGTGGAGTC GAAATAATGA AGCCGATGTT ATTTTGATGG ATATGAATAT GCCGGGAATT
GGTGGTTTGG AAGCCACAAG AAAAATTCTT CGTTACCAGT CCCATGCAAA AATCATTGTG
TTGACCATTC ATACTGAAGA TCCTTTCCCA ACTAAGGTGA TGCAAGCCGG GGCATCTGGC
TATCTGACGA AAGGCGCGAC ACCGCCAGAA GTGTTACAAG CCATTAGGCA AGTCGCACAC
GGACAACGGT ATTTATCTCC TGAGATTGCG CAGCAGATGG CGCTGAGCCA GTTTAATCAG
ACAGAGGATA ACCCTTTTAA GACTCTTTCC GAACGTGAGT TGCAGATCAT GATGATGATC
ACCAATGGTG AGAAAGTGAA TGATATCTCC GAGCAACTTA ATTTAAGTCC TAAAACCGTG
AATAGTTATC GCTATCGCTA TCGCTTATTT GCCAAGCTTG GAATAAGTGG TGACGTTGAG
CTTACTCGTT TGGCCATCCG TTACAAAATG TTAGACACAG GTCAGTTTTA A
 
Protein sequence
MISVYLVDDH ELVRTGIRRL LEDERGIKVV GEAGDGETAV QWSRNNEADV ILMDMNMPGI 
GGLEATRKIL RYQSHAKIIV LTIHTEDPFP TKVMQAGASG YLTKGATPPE VLQAIRQVAH
GQRYLSPEIA QQMALSQFNQ TEDNPFKTLS ERELQIMMMI TNGEKVNDIS EQLNLSPKTV
NSYRYRYRLF AKLGISGDVE LTRLAIRYKM LDTGQF