Gene Rpic_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0145 
Symbol 
ID6288357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp163047 
End bp163679 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID642623716 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_001897740 
Protein GI187927253 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCG TCCTGATTGC GGACGACCAC GAGATCGTTC GCGCCGGCCT TCGACAGTTT 
CTGTCCGAAG AGCGGGACAT CGAAGTCGCG GGGGAAGCGG CCAGCGGGGA AGAGGTGATG
GAGCAACTCC GCACCGGGGC CTTTGACGTC GTGGTGCTCG ACATTTCCAT GCCCGATCGC
AACGGCATCG ACACCCTCAA GCTGGCTCGC CAGCGCCATC CGGATCTGCC GGTGCTGATC
CTGTCGACCT TCCCGGAAGA CCAGTACGCC ATCAACCTGA TCCGCGCAGG GGCATCGGGC
TATCTGACAA AAGAAAGCGC GCCGGACGAG CTGGTCAAGG CCATCCGTAC CGTGTCGCAA
GGCCGTCGCT ATGTCAGCCC GACCGTGGCC GAGCTGCTCA TTGGCGGCCT GGAAAAGCCG
ACCGACCAGC CGCTGCACCA GACGCTGTCC AAGCGTGAGT TTCAGATCTT CTGCAAGCTG
GCGCGCGGGC AATCGGTATC GATCATCGCG GAAGAGCTGT TCCTGAGCGT CAAGACGGTC
AGCACTTACC GCACGCGGAT TCTGGAAAAG ATGGGCATGA AATCCAATGC CGATCTGACG
TATTACGCCA TCAAGAACGG CCTGGTTGAG TAG
 
Protein sequence
MIRVLIADDH EIVRAGLRQF LSEERDIEVA GEAASGEEVM EQLRTGAFDV VVLDISMPDR 
NGIDTLKLAR QRHPDLPVLI LSTFPEDQYA INLIRAGASG YLTKESAPDE LVKAIRTVSQ
GRRYVSPTVA ELLIGGLEKP TDQPLHQTLS KREFQIFCKL ARGQSVSIIA EELFLSVKTV
STYRTRILEK MGMKSNADLT YYAIKNGLVE