Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0145 |
Symbol | |
ID | 6288357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 163047 |
End bp | 163679 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623716 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001897740 |
Protein GI | 187927253 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGCG TCCTGATTGC GGACGACCAC GAGATCGTTC GCGCCGGCCT TCGACAGTTT CTGTCCGAAG AGCGGGACAT CGAAGTCGCG GGGGAAGCGG CCAGCGGGGA AGAGGTGATG GAGCAACTCC GCACCGGGGC CTTTGACGTC GTGGTGCTCG ACATTTCCAT GCCCGATCGC AACGGCATCG ACACCCTCAA GCTGGCTCGC CAGCGCCATC CGGATCTGCC GGTGCTGATC CTGTCGACCT TCCCGGAAGA CCAGTACGCC ATCAACCTGA TCCGCGCAGG GGCATCGGGC TATCTGACAA AAGAAAGCGC GCCGGACGAG CTGGTCAAGG CCATCCGTAC CGTGTCGCAA GGCCGTCGCT ATGTCAGCCC GACCGTGGCC GAGCTGCTCA TTGGCGGCCT GGAAAAGCCG ACCGACCAGC CGCTGCACCA GACGCTGTCC AAGCGTGAGT TTCAGATCTT CTGCAAGCTG GCGCGCGGGC AATCGGTATC GATCATCGCG GAAGAGCTGT TCCTGAGCGT CAAGACGGTC AGCACTTACC GCACGCGGAT TCTGGAAAAG ATGGGCATGA AATCCAATGC CGATCTGACG TATTACGCCA TCAAGAACGG CCTGGTTGAG TAG
|
Protein sequence | MIRVLIADDH EIVRAGLRQF LSEERDIEVA GEAASGEEVM EQLRTGAFDV VVLDISMPDR NGIDTLKLAR QRHPDLPVLI LSTFPEDQYA INLIRAGASG YLTKESAPDE LVKAIRTVSQ GRRYVSPTVA ELLIGGLEKP TDQPLHQTLS KREFQIFCKL ARGQSVSIIA EELFLSVKTV STYRTRILEK MGMKSNADLT YYAIKNGLVE
|
| |