| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2902 |
|---|
| Symbol | |
|---|
| ID | 4784532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3087624 |
|---|
| End bp | 3088262 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640091473 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001022090 |
|---|
| Protein GI | 124268086 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.255362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCA AAGTTGCGAT CGTCGATGAC CACGCCATCG TGCGTGCCGG TTTGCGCCAG
TATCTCGCCG AGCAGATGGA TCTGCAGGTC GTCGCCGAAG CCTCCAACGG CCGCGAGGCG
ATGGACCTGG TGCGCGCCGG CGGCATCGAT GTGCTGATCC TCGACGTGTC GATGCCCGAC
CAGAACGGCG TCGACGTGCT GTCGGGCATC CGCGCACGCG CGCCCGAGCT GCCGGTGCTG
ATCCTCAGCT CCTATCCCGA GACGCACTAC GCCACCGCCT TGCTCAAACA GGGCGCCAGC
GGTTACCTGA ACAAGGAGTG CGATCCTCAG GAGATCCTCA CCGCGGTGCG CACGCTGTCG
CGCGGGCGGC GCTACATCAC GCCGGCCGTG GCGGAGCTGC TGGCCGATCA GCTGGGTGGC
GGCAAGGCCG AAGGATTGCC TCATGAGCAG CTGTCCGAGC GCGAGTTGCA GGTGTTCCTG
CGCCTGGCAC AGGGCGAGAC CATCGGGGCC ATTGGCGAGA GTCTCTCGTT GAGCGTGAAG
ACGGTCAGCA CCTACCGCAC GCGGGTCATG GAGAAGATGA AGCTCGCGTC CAACAGCGAC
CTCACCTACT ACGCGCTGAA GAACGGCCTG ATCCAATAG
|
|---|
| Protein sequence | MSIKVAIVDD HAIVRAGLRQ YLAEQMDLQV VAEASNGREA MDLVRAGGID VLILDVSMPD
QNGVDVLSGI RARAPELPVL ILSSYPETHY ATALLKQGAS GYLNKECDPQ EILTAVRTLS
RGRRYITPAV AELLADQLGG GKAEGLPHEQ LSERELQVFL RLAQGETIGA IGESLSLSVK
TVSTYRTRVM EKMKLASNSD LTYYALKNGL IQ
|
|---|
| |