Gene Ajs_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3509 
Symbol 
ID4671449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3704333 
End bp3705052 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content61% 
IMG OID639840541 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_987698 
Protein GI121595802 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.325902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGTGC AATGCAAAGC AGATGGGCAG ATCTTCAGAC CATACCTTAC CGGGGAGCAA 
GGCGCTCTCC TCTTGAAAGA AGGCTCAATG ATCAAGATTG GCATTGTGGA TGACCATGCG
ATAGTCCGTG CCGGGCTGCG CCAATTTCTC TCGGAACATG TGGACCTGCG GGTCGTTGGC
GAGGCAAGCA ACGGCAGGGA AGCCATCGAT CTGGTGCGCG TTCACGAGAT CGACGTGCTG
GTGATGGACC TGTCCATGCC CGGCCAGAGC GGCTTGGATG CGTTGGCCAT GCTGCGCGCC
AAGGCGCCCG ACATGGGCAT CCTGATCCTC AGCGGCTACC CCGAGGAGCA CTATGCGATC
AATCTGATCC GCCAGGGTGC GAGCGGCTAT CTGAACAAGG AATGCGAGCC CAAGGAGATC
GTGGAGGCCA TCCGCACCAT CGCCCTGGGG CGCCGCTACC TGACCCCGTC CGTGGCCGAC
CTGCTGGCCC AGCAGCTCAA CCGCAAGGAC GATGCGCCGC CCCACGAGCA GCTGTCGGAG
CGCGAGTTCC AGGTGTTCCT CAAGCTGGCC AAGGGCGAGA CGGCGGGTGA CATCGCCAAG
TCGCTGTCGC TGAGCGTGAA AACCGTGAGC ACCTACCGCA CGCGGCTCAT GGAAAAGATG
GGGCTGTCCT CCAACAGCGA TCTGACGTAC TACGCGCTCA AGAACAAGCT CATCGATTGA
 
Protein sequence
MLVQCKADGQ IFRPYLTGEQ GALLLKEGSM IKIGIVDDHA IVRAGLRQFL SEHVDLRVVG 
EASNGREAID LVRVHEIDVL VMDLSMPGQS GLDALAMLRA KAPDMGILIL SGYPEEHYAI
NLIRQGASGY LNKECEPKEI VEAIRTIALG RRYLTPSVAD LLAQQLNRKD DAPPHEQLSE
REFQVFLKLA KGETAGDIAK SLSLSVKTVS TYRTRLMEKM GLSSNSDLTY YALKNKLID