Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3509 |
Symbol | |
ID | 4671449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3704333 |
End bp | 3705052 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639840541 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_987698 |
Protein GI | 121595802 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.325902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGTGC AATGCAAAGC AGATGGGCAG ATCTTCAGAC CATACCTTAC CGGGGAGCAA GGCGCTCTCC TCTTGAAAGA AGGCTCAATG ATCAAGATTG GCATTGTGGA TGACCATGCG ATAGTCCGTG CCGGGCTGCG CCAATTTCTC TCGGAACATG TGGACCTGCG GGTCGTTGGC GAGGCAAGCA ACGGCAGGGA AGCCATCGAT CTGGTGCGCG TTCACGAGAT CGACGTGCTG GTGATGGACC TGTCCATGCC CGGCCAGAGC GGCTTGGATG CGTTGGCCAT GCTGCGCGCC AAGGCGCCCG ACATGGGCAT CCTGATCCTC AGCGGCTACC CCGAGGAGCA CTATGCGATC AATCTGATCC GCCAGGGTGC GAGCGGCTAT CTGAACAAGG AATGCGAGCC CAAGGAGATC GTGGAGGCCA TCCGCACCAT CGCCCTGGGG CGCCGCTACC TGACCCCGTC CGTGGCCGAC CTGCTGGCCC AGCAGCTCAA CCGCAAGGAC GATGCGCCGC CCCACGAGCA GCTGTCGGAG CGCGAGTTCC AGGTGTTCCT CAAGCTGGCC AAGGGCGAGA CGGCGGGTGA CATCGCCAAG TCGCTGTCGC TGAGCGTGAA AACCGTGAGC ACCTACCGCA CGCGGCTCAT GGAAAAGATG GGGCTGTCCT CCAACAGCGA TCTGACGTAC TACGCGCTCA AGAACAAGCT CATCGATTGA
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Protein sequence | MLVQCKADGQ IFRPYLTGEQ GALLLKEGSM IKIGIVDDHA IVRAGLRQFL SEHVDLRVVG EASNGREAID LVRVHEIDVL VMDLSMPGQS GLDALAMLRA KAPDMGILIL SGYPEEHYAI NLIRQGASGY LNKECEPKEI VEAIRTIALG RRYLTPSVAD LLAQQLNRKD DAPPHEQLSE REFQVFLKLA KGETAGDIAK SLSLSVKTVS TYRTRLMEKM GLSSNSDLTY YALKNKLID
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