| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1607 |
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| Symbol | |
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| ID | 4605961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1964790 |
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| End bp | 1965434 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639780968 |
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| Product | response regulator |
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| Protein accession | YP_927484 |
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| Protein GI | 119774744 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000106395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATTTCTG TATATTTGGT CGACGATCAC GAGTTGGTTC GTACCGGGAT CCGCAGGATC
CTGGAAGATG AGCGGGGTAT CAAGGTTGTG GGTGAGGCGC CTGATGGTGA AACCGCTGTC
AGCTGGTCCA AACAGAATGA AGCTGACGTC GTACTGATGG ACATGAATAT GCCCGGTATC
GGCGGTATCG AAGCAACCCG TAAAATTCTG CGTTATCAGC CTCACGCACG CATTATTGTG
TTATCCATGC ACACTGAAGA TCCTTTCCCG ACCAAGGTCA TGCAGGCAGG GGCGTTTGGT
TATCTCACCA AGGGAGCCAA GCCACCGGAA GTGCTGCAAG CTATCCGTCA GGTTGCCTGT
GGGCAGCGTT ATCTCTCGCC TGAAATTGCC CAGCAGATGG CCTTGAGCCA ACTGACTCAG
ACAGACGAAA ATCCATTCAA GCAGGTATCA GAGCGCGAAC TGCAAATCGC GATGATGATT
ATCAACAGCA TGAAGGTGAA CGATATTGCC GAGCAGTTGA ATTTGAGCCC CAAGACGGTG
AACAGCTACC GCTATCGCCT ATTTGCCAAA TTAGGCATCA GCAGTGACGT TGAACTGACC
CGTTTGGCTA TTCGACATAA GATTATTGAT CCCGGCAAGT TTTAA
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| Protein sequence | MISVYLVDDH ELVRTGIRRI LEDERGIKVV GEAPDGETAV SWSKQNEADV VLMDMNMPGI
GGIEATRKIL RYQPHARIIV LSMHTEDPFP TKVMQAGAFG YLTKGAKPPE VLQAIRQVAC
GQRYLSPEIA QQMALSQLTQ TDENPFKQVS ERELQIAMMI INSMKVNDIA EQLNLSPKTV
NSYRYRLFAK LGISSDVELT RLAIRHKIID PGKF
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