Gene Bcen_4002 details

Gene Information

• Locus tag: Bcen_4002
• ID: 4096265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: +
• Start bp: 1171723
• End bp: 1172370
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638017296
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_623864
• Protein GI: 107026353
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAGG TGCTCATCGC CGACGACCAT ACGCTCGTAC GCGACGGTCT GCGGCACATC 
CTCCAGAACG CCACCGGATT CGAGGTGGCC GGCGAAGCCT TCGACGGCCC GTCGACGATC 
GCGCTGGTGC GGGCGACGCC CGCGCAGGTG CTCGTGCTCG ACCTGTCGAT GCCGGGCCGC 
AACGGCGTCG AGCTGATCAA GCAGATCAAG GACGAGAAGC CCGCGCTGCG CGTGCTCGTG 
CTGACGATGC ACGCGGAGCA GCAATACGCG GTGCGGGCGT TCCGCGCGGG CGCGTCGGGC 
TATCTGACGA AGGAAAGCGC GAGCGCGGAG CTGGTGGGCG CGGTCACGAA GGTGGCGTCG 
GGCGGCGTCT ACGTGAGCCT CGCGATGGCC GAGCAGTTCG CGCAGAGCCT GAACGAGCCG 
GCTGAAACGC TGCCGCACCA GCGGCTGTCC GATCGCGAAT TCGACGTGTT CCGGCGGATC 
GCCGCCGGCC AGACGCTGAC CGAGATCGCG AATGCGCTGT GCGTGAGCGC GAAGACGGTC 
AGCACCTACA AGACCCGGAT ACTGGAAAAG ATGCGGATGC CGCACGAAGC GGCGCTCGTG 
CGTTACGCGA TGCGGCACAA GCTGCTCGAC GAAACGGACG ACGTGTAA 

 

Protein sequence

MIKVLIADDH TLVRDGLRHI LQNATGFEVA GEAFDGPSTI ALVRATPAQV LVLDLSMPGR 
NGVELIKQIK DEKPALRVLV LTMHAEQQYA VRAFRAGASG YLTKESASAE LVGAVTKVAS 
GGVYVSLAMA EQFAQSLNEP AETLPHQRLS DREFDVFRRI AAGQTLTEIA NALCVSAKTV 
STYKTRILEK MRMPHEAALV RYAMRHKLLD ETDDV