Gene CPS_2033 details

Gene Information

• Locus tag: CPS_2033
• ID: 3522621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 2105571
• End bp: 2106197
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637284493
• Product: LuxR family DNA-binding response regulator
• Protein accession: YP_268761
• Protein GI: 71282148
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAAGG CAGTTATCGT AGATGACCAC CCTTTGTTCC GACAAGGTAT AAGGTTATTA 
CTTGAAAGCT CGGGGAACGT GGAGGTTATT GGGGATGCAA GTAATGCTAT TGAAGGTGAG 
CGCCTTATTA TGGGAAAACT ACCTGATGTC GCTGTTTTGG ATATTGGTTT AGTAGGAGAA 
AGTGGGTTAC AACTTGCAGA AAAATTACGG GCAAGAGGAT ACAAAAATGC AATTGTCATG 
GTTACCATGC ACACCGAAGT TTCTATTTTT AAGCGTGCAG CTGCTATTGC GAAAGTTGAA 
GGGTATGTAC TTAAGTTGGA TGCAGCAGAG GACTTGGAAA ATGCCGTTTA TAGAGCTTGT 
AATGGACAGA AGTTTGTAAG CCCTAGTTTG GCCCAAGAAA TGGCATGGAT GGAGGATGAC 
AGCCAAAAAA CGGACAGTCT ACTTACAAAA AGAGAAGAAG AGGTACTTAT TCTTATCGCA 
GATGGGCTTG GAAGTGATGC CATTGCTTTG CGCTTAGATC TGAGCAAACG AACAATTGAC 
TCACATAGAG CGAATATTAG GAAGAAATTA GGACTAACTA ATTCGGTTGA ATTAACTCGT 
TATGCAATCG AACAAGGCTT GATTTAA 

 

Protein sequence

MIKAVIVDDH PLFRQGIRLL LESSGNVEVI GDASNAIEGE RLIMGKLPDV AVLDIGLVGE 
SGLQLAEKLR ARGYKNAIVM VTMHTEVSIF KRAAAIAKVE GYVLKLDAAE DLENAVYRAC 
NGQKFVSPSL AQEMAWMEDD SQKTDSLLTK REEEVLILIA DGLGSDAIAL RLDLSKRTID 
SHRANIRKKL GLTNSVELTR YAIEQGLI