Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3100 |
Symbol | |
ID | 4310792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3421399 |
End bp | 3422055 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638150940 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_774990 |
Protein GI | 115353151 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.650822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGG ACATCCTGCT CGTGGACGAC CACGCAATCG TCCGGCAAGG GGTCCGCCAC TTGCTGATCG ACCGCGGCGT CGCGCGCGAA GTGACCGAAG CCGAGACCGG CAGCGATGCG GTGGCCGCCG TCGACCGCCA GACCTTCGAC GTGATCCTGC TCGATATCTC GCTGCCGGAC ACCAACGGCA TCGAGTTGCT CAAGCGCATC AAGCGCAAGC TGCCGGGCAC GCCGGTGCTG ATGTTCTCGA TGTACCGCGA GGACCAGTAC GCGGTGCGCG CGCTGAAGGC CGGCGCGTCC GGCTATCTGT CGAAGACGGT GAATGCCGCG CAGATGATCG GCGCGATCCA GCAGGTCGCG GCCGGCCGCA AGTACGTGAG CCCGGCGATG GCCGAGGCGC TCGCCGAATA CGTGTCGTTC GAGAACGAAC CGCTGCCGCA CGAGAAGCTG TCCGATCGCG AATACCAGAC GCTCTGCATG CTGGCATCGG GCAAGCGCCT CACCGATATC GCGAACACGC TATCGCTGTC GGTGAAGACG GTCAGCGTGT ACCGGTCGCG GCTGCTCGAG AAGATGCGGC TGTCGAACAA CGCGGAACTG ACGTTCTACG TGATGAGCAA CCGGCTCGTC GACATGGCGC CTGCATCGGG CGCCTGA
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Protein sequence | MSLDILLVDD HAIVRQGVRH LLIDRGVARE VTEAETGSDA VAAVDRQTFD VILLDISLPD TNGIELLKRI KRKLPGTPVL MFSMYREDQY AVRALKAGAS GYLSKTVNAA QMIGAIQQVA AGRKYVSPAM AEALAEYVSF ENEPLPHEKL SDREYQTLCM LASGKRLTDI ANTLSLSVKT VSVYRSRLLE KMRLSNNAEL TFYVMSNRLV DMAPASGA
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