More than 300 homologs were found in PanDaTox collection
for query gene BBta_6911 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  100 
 
 
584 aa  1184    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  68.89 
 
 
583 aa  713    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  70.03 
 
 
584 aa  732    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  67.51 
 
 
584 aa  728    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  67.47 
 
 
583 aa  734    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
713 aa  273  9e-72  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  29.86 
 
 
495 aa  233  6e-60  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  48.94 
 
 
454 aa  201  1.9999999999999998e-50  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
482 aa  201  3e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  46.29 
 
 
448 aa  198  2.0000000000000003e-49  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  49.42 
 
 
484 aa  196  8.000000000000001e-49  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
468 aa  189  1e-46  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
511 aa  187  4e-46  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
470 aa  186  9e-46  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
470 aa  185  2.0000000000000003e-45  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
470 aa  183  1e-44  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  44.25 
 
 
487 aa  181  2.9999999999999997e-44  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
475 aa  179  1e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  31.66 
 
 
481 aa  176  9.999999999999999e-43  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  26.53 
 
 
523 aa  171  3e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
468 aa  169  2e-40  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
468 aa  168  2e-40  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
476 aa  169  2e-40  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_010511  M446_6192  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
573 aa  164  6e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.361355  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  27.18 
 
 
523 aa  163  1e-38  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  27.18 
 
 
523 aa  161  3e-38  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
524 aa  146  1e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
534 aa  144  4e-33  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  40 
 
 
563 aa  144  5e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  38.82 
 
 
538 aa  143  8e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
672 aa  140  3.9999999999999997e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  38.82 
 
 
535 aa  140  4.999999999999999e-32  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  36.76 
 
 
534 aa  140  6e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
741 aa  140  7.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  35.37 
 
 
527 aa  140  8.999999999999999e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
563 aa  139  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  35.06 
 
 
534 aa  139  2e-31  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  40.16 
 
 
656 aa  139  2e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
561 aa  138  3.0000000000000003e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  35.23 
 
 
525 aa  137  4e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
563 aa  137  7.000000000000001e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  37.12 
 
 
567 aa  136  8e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  39.02 
 
 
565 aa  136  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  39.31 
 
 
572 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
674 aa  136  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
561 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
673 aa  135  1.9999999999999998e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
578 aa  135  3e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  40 
 
 
560 aa  134  3.9999999999999996e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
578 aa  134  3.9999999999999996e-30  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
562 aa  134  5e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  27.03 
 
 
533 aa  133  7.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  38.62 
 
 
731 aa  133  7.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  37.64 
 
 
552 aa  133  7.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  40.64 
 
 
518 aa  133  9e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  36.57 
 
 
691 aa  133  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
675 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  39.37 
 
 
656 aa  133  1.0000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
563 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  38.1 
 
 
674 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
546 aa  131  3e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  44.02 
 
 
563 aa  131  3e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  42.15 
 
 
714 aa  131  3e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
730 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  35.14 
 
 
965 aa  131  4.0000000000000003e-29  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
561 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  39.75 
 
 
688 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  38.67 
 
 
561 aa  131  4.0000000000000003e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  41.75 
 
 
669 aa  130  6e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  38.91 
 
 
565 aa  130  7.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  37.32 
 
 
573 aa  130  8.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.01 
 
 
716 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  38.28 
 
 
542 aa  130  8.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
578 aa  130  9.000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
567 aa  130  9.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  38.82 
 
 
602 aa  130  9.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2039  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.83 
 
 
514 aa  129  1.0000000000000001e-28  Maricaulis maris MCS10  Bacteria  normal  0.867324  normal  0.91864 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  43.65 
 
 
1150 aa  129  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
522 aa  130  1.0000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  38.29 
 
 
563 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  38.55 
 
 
688 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  30.86 
 
 
527 aa  128  2.0000000000000002e-28  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  37.42 
 
 
514 aa  129  2.0000000000000002e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  34.48 
 
 
545 aa  128  2.0000000000000002e-28  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
563 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
688 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
561 aa  129  2.0000000000000002e-28  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  35.71 
 
 
562 aa  129  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
538 aa  129  2.0000000000000002e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3377  methyl-accepting chemotaxis sensory transducer  36.53 
 
 
563 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.528008  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  40 
 
 
904 aa  129  2.0000000000000002e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_007958  RPD_0336  chemotaxis sensory transducer  40.85 
 
 
563 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0752  methyl-accepting chemotaxis sensory transducer  38.27 
 
 
716 aa  128  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.713683  normal 
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
696 aa  128  3e-28  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_010172  Mext_0809  chemotaxis sensory transducer  39.76 
 
 
717 aa  128  3e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  40.17 
 
 
540 aa  128  3e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
566 aa  128  3e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
561 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007778  RPB_0489  methyl-accepting chemotaxis sensory transducer  37.93 
 
 
564 aa  127  4.0000000000000003e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.301128  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  42.13 
 
 
545 aa  127  4.0000000000000003e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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