More than 300 homologs were found in PanDaTox collection
for query gene Rru_A1554 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  100 
 
 
495 aa  998    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  45.15 
 
 
475 aa  395  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
470 aa  392  1e-108  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
470 aa  386  1e-106  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  42.6 
 
 
511 aa  370  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  42.22 
 
 
482 aa  366  1e-100  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  41.98 
 
 
470 aa  358  9e-98  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
468 aa  357  1.9999999999999998e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  41.47 
 
 
484 aa  353  4e-96  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
476 aa  340  2e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
468 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
468 aa  339  5e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  41.63 
 
 
481 aa  318  1e-85  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
487 aa  306  7e-82  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  42.63 
 
 
448 aa  305  1.0000000000000001e-81  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  38.99 
 
 
454 aa  290  4e-77  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  33.49 
 
 
525 aa  244  1.9999999999999999e-63  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  32.96 
 
 
474 aa  241  2.9999999999999997e-62  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  31.75 
 
 
468 aa  235  1.0000000000000001e-60  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  31.25 
 
 
546 aa  231  2e-59  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  32.26 
 
 
584 aa  229  6e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
526 aa  223  8e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  31.31 
 
 
527 aa  221  1.9999999999999999e-56  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
522 aa  221  3e-56  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  31.65 
 
 
533 aa  219  7e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  30.65 
 
 
535 aa  219  7e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
522 aa  218  2e-55  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
522 aa  218  2e-55  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  31.19 
 
 
534 aa  218  2e-55  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  30.65 
 
 
538 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
522 aa  217  2.9999999999999998e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  33.19 
 
 
534 aa  216  5.9999999999999996e-55  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
522 aa  216  5.9999999999999996e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  30.54 
 
 
693 aa  216  8e-55  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  34.55 
 
 
534 aa  216  9.999999999999999e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  32.8 
 
 
524 aa  214  2.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  31.22 
 
 
696 aa  210  6e-53  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
523 aa  209  1e-52  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  32.19 
 
 
527 aa  208  2e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
523 aa  206  5e-52  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  31.35 
 
 
523 aa  206  7e-52  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  55.76 
 
 
713 aa  206  1e-51  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  35.87 
 
 
514 aa  202  9.999999999999999e-51  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
583 aa  201  3e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  30.33 
 
 
693 aa  201  3e-50  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  28.72 
 
 
698 aa  200  3.9999999999999996e-50  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
707 aa  198  2.0000000000000003e-49  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
583 aa  197  4.0000000000000005e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  31.69 
 
 
695 aa  196  1e-48  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
584 aa  189  7e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  26.02 
 
 
480 aa  189  9e-47  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  28.94 
 
 
696 aa  188  2e-46  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
584 aa  186  7e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  30.2 
 
 
505 aa  183  6e-45  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  27.96 
 
 
715 aa  171  4e-41  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  30.43 
 
 
598 aa  167  2.9999999999999998e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  31.26 
 
 
598 aa  167  5e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008789  Hhal_0534  methyl-accepting chemotaxis sensory transducer  29.15 
 
 
439 aa  161  2e-38  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
598 aa  159  1e-37  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  28.68 
 
 
573 aa  157  3e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
602 aa  147  6e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  41.51 
 
 
578 aa  144  5e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
578 aa  142  1.9999999999999998e-32  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  29.94 
 
 
511 aa  141  3e-32  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6192  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
573 aa  139  1e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.361355  normal 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
578 aa  139  1e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6711  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
568 aa  132  1.0000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  25.16 
 
 
525 aa  119  9e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
645 aa  100  5e-20  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_008700  Sama_2140  putative methyl-accepting chemotaxis sensory transducer  30.92 
 
 
479 aa  99.4  1e-19  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1930  chemotaxis sensory transducer  30 
 
 
625 aa  98.6  2e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  28.36 
 
 
645 aa  98.2  3e-19  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  28.36 
 
 
645 aa  98.2  3e-19  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
484 aa  98.2  3e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0819  chemotaxis sensory transducer  30 
 
 
627 aa  98.2  3e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.113637  n/a   
 
 
-
 
NC_009051  Memar_1543  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
947 aa  98.2  3e-19  Methanoculleus marisnigri JR1  Archaea  normal  0.393804  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  29.01 
 
 
645 aa  97.1  6e-19  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_011832  Mpal_2271  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.47 
 
 
1104 aa  96.3  1e-18  Methanosphaerula palustris E1-9c  Archaea  normal  0.292314  normal 
 
 
-
 
NC_009092  Shew_2902  methyl-accepting chemotaxis sensory transducer  29.44 
 
 
479 aa  95.9  1e-18  Shewanella loihica PV-4  Bacteria  normal  0.56843  normal  0.473301 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.77 
 
 
645 aa  94.7  3e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  27.74 
 
 
982 aa  94.7  4e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
707 aa  93.6  7e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_013456  VEA_002443  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  28.19 
 
 
541 aa  92.8  1e-17  Vibrio sp. Ex25  Bacteria  unclonable  0.00000057049  n/a   
 
 
-
 
NC_013922  Nmag_3325  methyl-accepting chemotaxis sensory transducer  31.44 
 
 
339 aa  92.8  1e-17  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  27.76 
 
 
702 aa  92  2e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  30.58 
 
 
564 aa  92  2e-17  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1775  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.87 
 
 
937 aa  91.3  3e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.303689  normal 
 
 
-
 
NC_013202  Hmuk_1087  methyl-accepting chemotaxis sensory transducer  28.49 
 
 
529 aa  91.3  3e-17  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.766916  normal 
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
484 aa  91.3  3e-17  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  29.08 
 
 
484 aa  91.3  3e-17  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0861  chemotaxis sensory transducer  33.19 
 
 
481 aa  91.3  4e-17  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  28.79 
 
 
484 aa  91.3  4e-17  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_2382  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
871 aa  90.9  5e-17  Halorhabdus utahensis DSM 12940  Archaea  normal  0.115192  n/a   
 
 
-
 
NC_011832  Mpal_1068  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30.62 
 
 
885 aa  90.5  6e-17  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.122951 
 
 
-
 
NC_009997  Sbal195_2820  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
484 aa  90.5  6e-17  Shewanella baltica OS195  Bacteria  normal  0.0806929  normal  0.41842 
 
 
-
 
NC_011884  Cyan7425_1064  methyl-accepting chemotaxis sensory transducer with GAF sensor  28.06 
 
 
879 aa  90.5  7e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.698769  hitchhiker  0.00000570114 
 
 
-
 
NC_009052  Sbal_2727  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
484 aa  90.5  7e-17  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000872044  n/a   
 
 
-
 
NC_009943  Dole_1751  methyl-accepting chemotaxis sensory transducer  28 
 
 
739 aa  90.1  8e-17  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000403913  n/a   
 
 
-
 
NC_009665  Shew185_2744  methyl-accepting chemotaxis sensory transducer  32.75 
 
 
484 aa  90.1  8e-17  Shewanella baltica OS185  Bacteria  normal  0.234847  n/a   
 
 
-
 
NC_009831  Ssed_1664  methyl-accepting chemotaxis sensory transducer  30.96 
 
 
482 aa  90.1  8e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  0.587548  normal 
 
 
-
 
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