| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4172 |
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| Symbol | |
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| ID | 4024694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4638903 |
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| End bp | 4640657 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964380 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_571292 |
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| Protein GI | 91978633 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCA GTCTGTTCCG CAAGCGGCTG CCGGAAACGG CGGCCCCTGA AAGCGTGGTG
AATCAGGCCC CCGAAACGCC GGCGCAGGAC CATTCAGCCG AGGCCGAGTC GGCGCACGAG
ATCCTCGAAT TGCTGGAGCT CGAACTCGGT TCGCTAATCC GCCAGCTCGA ACGCGCTGCG
CATTCGGTGG CCGGCGGCGT GCAATCGACG ACGACGACGC TGCACACCAT CCGCGAGCGC
ACCGACGCGC TGACCGGAAG GACCAGCGCG GCGCGGGCCT CCGCGACGTC GTTTTCGCAG
GCCGCAGACA AATTCACCCA TTCGGCCGAG GGCATCGGCA TCCAGGTCCG CCAGGCCTCG
CAGCTCGCCG ACGACGCCAG CGCCGCAGCC AATGACGCCA GCGCCAATGT CGAGCGGCTG
CGCGAATCGT CGGCGGCGAT CGGCAATGTG GTCAATCTGA TCGCGCAGAT CGCGCGGCAG
ACCACGCTGC TGGCGCTGAA CTCGACGATC GAAGCCGCGC GCGCCGGCGC CGCCGGCCGC
GGCTTTGCGG TGGTCGCGAC CGAAGTGAAG GCGCTCGCGG TGCAGACCCA GGAGGCGACC
GAGGAGATCA AACGCAAAAT CGACGCGCTG CAGCGTGACG CGGCGAGTTC GGCCGACGCC
GTCCACCGCA TCACCAGCGC GATCGCTGCG ATCCGCCCGG TGTTCGACCA CGTCAACGGC
GCGGTCGCCG AACAAAACCG CACCACCGGC GACGTCGCCG GCAACGCCGC GACCGCGAAC
ACCTTCATCG TCTCGGTCGG CGACAGCGCC GCCGAGATCG ACAGCGCCAC CCGCGAAGCC
GAGCAGCATG GCGACGAGGT CGCCAAAGCC GGCCAAACCG TGACGATGTT CGCCGAGAAG
TTGCGCGCCC GCACCGCCCT GCTGCTGAAA CAGGGCGATC GCGAGGACGC GCGCAAGCGC
GAGAAGCTGC CGTGCCATCT GTCGATCGAG GTCGACACAC CGCGCGGCAG GATCACCGCG
CCGGTCTATG AGATCTCGCA GGACGGGGTG CTGATCGCCG GGCCCGGCGC TTCGACGCTG
CAGGTCAATG AGACGCTCGC CGCCGAATTG CAGGACATCG GCGCCTGCAG GATTCGCGTC
ACCGGATACA CCAGCGCCGG CGCACAGGCG AAGTTCGTCG CCGCCGATCC GCGTCTGCAG
GAGCGGATCG AGGACCGGCT GTGGGCGATC CGCGACGAAA ACACCGAATT CGTCACCCGC
GCGCTCGAGG CCGGCGGGGA GCTGCACCGC ATCTTCGAAC GCGGCATCGC CACCGGCGCG
ATCACGATGG ACGACATGTT CGACGACAAC TACGTCGAGA TCGCCGGCAG CAACCCGACG
CAGTATCGCA CCAGGATCCT GCCGTGGGCC GACCAGGCGT TGCCGCCGTT TCAGGAGGCG
TTTCTCGCCA GAGATCCGCG GATGACGTTC TGCGTCATGA TCGACCGCAA CGGCTATCTG
CCGGTGCACA ACCGAATCTA CTCGCAACCG CAGCGGCCGG GCGACGTCGT CTTCAACACC
GCTAATTCGC GCAACCGGCG CATCTTCTAC GATCCGGCGG GGCTCGCCGC CGGCCGCAAC
ACCCGCTCGT TCCTGATCCA AAGCTACGCC CGCGACATGG GTGGTGGTAA GATGGTAATG
ATGCGCGAGA TCGACGTGCC GGTGAAGGTC CGCGGCCGCC ACTGGGGCGG GTTCCGCACG
GCGTACAAAC TGTAA
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| Protein sequence | MAFSLFRKRL PETAAPESVV NQAPETPAQD HSAEAESAHE ILELLELELG SLIRQLERAA
HSVAGGVQST TTTLHTIRER TDALTGRTSA ARASATSFSQ AADKFTHSAE GIGIQVRQAS
QLADDASAAA NDASANVERL RESSAAIGNV VNLIAQIARQ TTLLALNSTI EAARAGAAGR
GFAVVATEVK ALAVQTQEAT EEIKRKIDAL QRDAASSADA VHRITSAIAA IRPVFDHVNG
AVAEQNRTTG DVAGNAATAN TFIVSVGDSA AEIDSATREA EQHGDEVAKA GQTVTMFAEK
LRARTALLLK QGDREDARKR EKLPCHLSIE VDTPRGRITA PVYEISQDGV LIAGPGASTL
QVNETLAAEL QDIGACRIRV TGYTSAGAQA KFVAADPRLQ ERIEDRLWAI RDENTEFVTR
ALEAGGELHR IFERGIATGA ITMDDMFDDN YVEIAGSNPT QYRTRILPWA DQALPPFQEA
FLARDPRMTF CVMIDRNGYL PVHNRIYSQP QRPGDVVFNT ANSRNRRIFY DPAGLAAGRN
TRSFLIQSYA RDMGGGKMVM MREIDVPVKV RGRHWGGFRT AYKL
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