Gene MADE_03575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03575 
Symbol 
ID6778217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3855787 
End bp3857364 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content43% 
IMG OID642757023 
Productmethyl-accepting chemotaxis protein 
Protein accessionYP_002127861 
Protein GI196158372 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT TGGTGTTAGC TGTTGTCGCA GGGCTGATAA ATGTAGTGAT GTCGTTTCTA 
ACCATGAGCG TCCTGATTTC TACTGCTGTC ACCTTTTTTA CTATTCTTTT AGCGTCTTTC
ATTTTTAATA AAACGCTAGG CAGCGGAAAA ACGAATGCGT TTTCTGAAGG AGTAGGGGAT
GACAGCCTTT CATCGAGTCA ACCTCCGTCG TCGCAAACTG ATGCAACCAA GGTCAGTCAC
GCCGCCAGCA ATATCGCAAT TGGCGGTGCC TCTATTTCGT TTTTTTTGGA GCAACTAGCA
AACGCTTTTA AAGAACAAGT CGCTAATATT GGTGAAATGA GCGGCAGGCT ACAACATTTA
GAGTCGTCGT CTAGTCAGTT AGATGCATTA GCCAAAACAG CCTCTTCATC TATGAATGAG
TCTGATGAGA AAACACAGTT TGGAAGTACG TCGCTAAAAG AAGTGTTAAA CCAACAACAG
CAGTTAGTTA AAAATATCAA TGCGTCATCT GACGCGCTCA TTACCTTAAA AAGCAAAGCT
GAAGGTATAA GTACAATCAC TAACACCATT AATCAGTTGG CCGATCAAAC GAATATGCTC
GCGTTAAATG CAGCAATTGA AGCCGCTAGG GCTGGCGAAC AAGGCCGTGG TTTTGCTGTA
GTTGCTGACG AAGTCAGGGA ACTCGCAAAG AAAACGACAG ATGCAACGTC TGGAATTGAA
ACTTTGCTTC AGGATATGAA TACCAGTAGC CAAAAAGCGG TAGCTACTAT GGATAAAGTA
CTTAGTTCAA GTGACGATAT GAACGCTAAG CTACAGGAGA GTGAAGCGGC TATATCTCAT
TCAAGCTTGT TATCTACTAA AGCCCGGGAC TCTATGGAGG CAATGCAGGG TATGGTAGAG
GATAATGCAG AGCACAGCGC AGGTATCAGC GCCAATATTC TACAACTTCA TCAAACTACG
GGTAATTTGG AGCGCGATCT TTCTGACGTT TCAGCGCAAG CCTTATCTCT TAGCAGCCAA
GCGGAAGATA TTTTTAGGCT ATTAGAAAGT TTTGACGTAA ACGACAGAAA TAGCGAAGTA
AGAGATATTG CGATAAGTAC AGCGAAAACC ATAGGTAAAC GATTCGAACA GGCTATTAAA
GCGGGCGACA TTGCCGAGTC GCAATTATTT AGCTTCGACT ATACGCCCAT TACAAACACT
AACCCGTTAA AGCACACGAC ACCTTTCGAT AAATTCACCG ATAAGATATT ACCCGAAATT
CAAGAGCCTT TGCTAACAGC GCACGATTTC ATAATTTATG CTGGCGCGGT TGATAAAAAT
GGCTACTTCC CCACCCATAA TAAGAAGTTC AGTCAGCCGC TTACGGGTAA TTATGACACT
GACCTTGCAA ATAACCGAAC AAAACGGATA TTTGATGATA AGACAGGAAG CCGCTGTGGT
GCTAATACCT CAACGTTTCT ACTTCAAACC TATAAACGAG ATACGGGAGA AGTTATGCAT
GATTTATCAG CCCCTATTTA TGTGAACGGT AAACACTGGG GCGGGTTTCG TATAGGTTAT
AAAGCACAAG CGCAGTAA
 
Protein sequence
MNYLVLAVVA GLINVVMSFL TMSVLISTAV TFFTILLASF IFNKTLGSGK TNAFSEGVGD 
DSLSSSQPPS SQTDATKVSH AASNIAIGGA SISFFLEQLA NAFKEQVANI GEMSGRLQHL
ESSSSQLDAL AKTASSSMNE SDEKTQFGST SLKEVLNQQQ QLVKNINASS DALITLKSKA
EGISTITNTI NQLADQTNML ALNAAIEAAR AGEQGRGFAV VADEVRELAK KTTDATSGIE
TLLQDMNTSS QKAVATMDKV LSSSDDMNAK LQESEAAISH SSLLSTKARD SMEAMQGMVE
DNAEHSAGIS ANILQLHQTT GNLERDLSDV SAQALSLSSQ AEDIFRLLES FDVNDRNSEV
RDIAISTAKT IGKRFEQAIK AGDIAESQLF SFDYTPITNT NPLKHTTPFD KFTDKILPEI
QEPLLTAHDF IIYAGAVDKN GYFPTHNKKF SQPLTGNYDT DLANNRTKRI FDDKTGSRCG
ANTSTFLLQT YKRDTGEVMH DLSAPIYVNG KHWGGFRIGY KAQAQ