| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1554 |
|---|
| Symbol | |
|---|
| ID | 3834971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1833839 |
|---|
| End bp | 1835326 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825646 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_426641 |
|---|
| Protein GI | 83592889 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGATAT TTCGCGTCGC CATCGCCCAA CCATCGCCGG AGACTCCGGT CCAACCGGCC
TGCCCTCCCC TTGGGGACTC CGGTGCCCCG GGCGCCGCCG GGCCGACCTC GGAAACCCTG
ACCGCCCTGA TCAACGATGT GCTGCACCGG GTGGAAACCC TGTCGATCGA TCTCGCCGAT
GTCGCCGGCG ATATCGACAC CATCGCCCGC TTCGTCAAAC GCCAGGAGGA GTTGTTCTCC
CACCTCGTCG TCCTGGCCCA GGATGTCCAA GGCGCCATCG ACCGGATCGA CAACGCCGGG
CAATCGACCA ACGCGGTCAC CAAGGACGCC TCGGACAGCA TGCGGCGCTC GGGGGAGGCC
ATTCGCGCCG CCATCGAGAA CATCGAAGGC TTGACCCGCG CCGTCAGCGG CATCGCCGGT
CGGCTGTCCA CGGTCGAACA ATCCCTTGAC GGCGTCAACC AATCCTCGGC GATCATCCGT
ACCGTCGCCC AGCAGACCAA TCTTCTGGCG CTGAACGCCA CCATCGAAGC CGCCCATGCC
GGCGATGCCG GGCGGGGCTT CGCCATCGTC GCCAAGGAGG TGAAAACCCT GGCCGGCCAG
TCCCAGGGGG CGGCCACCGG CATCCAGAAG ACGGTCAATT CCCTTAGCTC GAGCCTCGGC
GAACTGATCG AGACTAGCGG CACGATCGTC GCCAACGCCC AGGAGGCCAA CAATGGCATC
GCCGTGATCA ACGAGGCGGT CTCGGGCTTC AGCGGCTCGA TTTCCATCGT TGACCGCCAT
GTCGACGAAA TCGCCGGCGC CACCGCCACC ACCAAGGACC GCTGCGCCGA TATCGTCCGC
GAAATCCATC AGGCGGCCGA AGGCGTTTCG GCGACCAGCC GCAATCTGGC CAGCGCCGAC
CAGCGGGTCT CGTCGATCGT GAGCGTGGGC GAGGCGCTGA TCGCCACCAT CTTGGAAAGC
GGCGTCGAAA CCCCCGATAC CCCCTTCATC GCCGCCGTGC GCGACGCGGC CGAACAGGTG
GCCGCGGCGC TTGAAGGCGC CATCGATCGC GGCCAGATCA GCTTGGCCGC GCTGTTTAGC
GAGGTCTATA CCCCGATCCC CGGCAGCGAC CCCGCCCAGG TCACCACCGC CTTCACCGAT
CTGGTCGACC GGCTGTTTCC ACCGATCCAA GAGCCTTTGT TGACCCTCAA CGAAAAGGTG
GTGTTCTGCG CCGCCGTCGA TCGCAATGGC TATCTGCCCA CCCACAACCA AAAGTTCTCA
AAGCCCCAGG GCCCCGATCC GGTCTGGAAC AACGCCAACA GCCGCAATCG CCGCATCTTC
AATGACCGCA CCGGTTTGGC CGCCGGGCGC AATACCCGGC CCTTTCTGGT CCAAACCTAC
CGCCGCGACA TGGGCGGCGG CTCCTTCATC ATGATGAAGG ACGCCAGCGC GCCGATCTTC
GTCAAGGGTC GCCATTGGGG GGGCTTTCGC ATGGGCTATC GCCTGTAA
|
|---|
| Protein sequence | MRIFRVAIAQ PSPETPVQPA CPPLGDSGAP GAAGPTSETL TALINDVLHR VETLSIDLAD
VAGDIDTIAR FVKRQEELFS HLVVLAQDVQ GAIDRIDNAG QSTNAVTKDA SDSMRRSGEA
IRAAIENIEG LTRAVSGIAG RLSTVEQSLD GVNQSSAIIR TVAQQTNLLA LNATIEAAHA
GDAGRGFAIV AKEVKTLAGQ SQGAATGIQK TVNSLSSSLG ELIETSGTIV ANAQEANNGI
AVINEAVSGF SGSISIVDRH VDEIAGATAT TKDRCADIVR EIHQAAEGVS ATSRNLASAD
QRVSSIVSVG EALIATILES GVETPDTPFI AAVRDAAEQV AAALEGAIDR GQISLAALFS
EVYTPIPGSD PAQVTTAFTD LVDRLFPPIQ EPLLTLNEKV VFCAAVDRNG YLPTHNQKFS
KPQGPDPVWN NANSRNRRIF NDRTGLAAGR NTRPFLVQTY RRDMGGGSFI MMKDASAPIF
VKGRHWGGFR MGYRL
|
|---|
| |