| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1286 |
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| Symbol | |
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| ID | 6408943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1356868 |
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| End bp | 1358619 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711185 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001990301 |
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| Protein GI | 192289696 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTCG GCCTATTTCG CAAGCGGTCG CCGGAAACGG CGACCCTGAA CGTCGTGGCT
GCCTCGCCCC CGGCTGCAGC CGAACCGACG GTCGCGGAGG CCGATTCCGC CCGTGAAATC
CTCGAATTGC TTGAGCTGGA GCTCGGCTCG CTGATTCGGC AGCTCGAACG TGCTGCCCAT
TCCGTGACCA CCGGGGTGCA GTCGACCACC TCGACGCTTC ACACCATCCG CGAGCGCACC
GACGCCCTCA CCGGCCGGAC CAGTGCCGCC CAGACGACCG CGAGTTCGTT CTCCCAGGCG
GCCGACAAAT TCACCCATTC GGCCCATGGC ATCGGCGCAC AGGTCCGTCA GGCATCGCAA
CTCGCCGACG ACGCCAGCGC CGCCGCCGAC GAGGCCACGG CCAATGTCGA GCGGCTGCGC
GATTCGTCGG CTGCGATCGG CAATGTGGTC AATCTGATCT CCCAGATCGC CCGGCAGACC
ACCCTGCTGG CGCTGAACTC CACGATCGAG GCGGCCCGCG CCGGCGCCGC CGGCCGCGGC
TTCGCCGTGG TGGCGACCGA GGTCAAGGCG CTGGCGGTGC AGACCCAGGA GGCGACCGAG
GAGATCAAGC GCAAGATCGA CGCCCTTCAG CGCGACGCGT CCAGCTCGGC CGACGCCGTC
CATCGCATCA CCAGCGCGAT CTCGGCGATC CGGCCGGTAT TCGAGACAGT CAACGGCGCG
GTAGCCGAAC AGAACGCCAC CACCGGCGAA ATCGCCGGCA ACGCCACCTC GGCGTCGACC
TTCATCGCCT CGGTCGGCGA CAGCGCCGCC GAGATCGACA GCGCCACCCG CGAGGCAGAA
CAACACGGCG ACGAGGTCGC CCGCGCCGGC CAAAACGTGA CCAACTTCGC CGAGAAGCTG
CGGGCCAGGA CCGCGGTTCT ACTCAAGCTC GGCGACCGCG AAGACGCACG ACGCCGCGAG
AAGCTGCCGT GCCACCTGCA GATCGAGCTC GACACTTCGC GCGGCAGGAT CACCGCGCCC
GTGTACGAAA TCTCGATGGA CGGCGTGTTG ATCAGCGGCC CATCCGCCGC CGCCCTGACG
ACCGGCCAGC AACTCTCCGC TGAGCTGCAG GACATCGGCG CCTGCCGCAT CCGCATCGCC
GAGCACGGCA AGGCCGGGGC GCTGGCGCTA TTCGTCGCCC CTGACGCGGC GCTGCAGAGC
CGGATCGAGG ATCGGCTGTG GGCGATCCGC GACGAGAACA CCGAGTTCGT CACCCGCGCG
ATCGAGGCCG GGCATGAACT TTCGAAGATC TTCGAACGCG GCATTGCCTC AGGCGCGCTG
ACGCTGGAGC AGATGTTCGA CGAAAACTAC ATCGAGATCG CCGGAACCGA CCCGAAGCAA
TACCGCACGC AGTATCTCGA CTGGGCCGAC CGCGCGCTGC CACCGTTCCA AGAAAGCTTT
CTGGCCAAGG ACCGGCGGAT GGCGTTCTGC GTGATGATCG ACCGCAACGG TTATCTGCCG
GTGCACAACA AGCTGTACTC GCAGCCGCAG CGGCCGGGCG ACGTCGCTTT CAACACCGCC
AACTCACGCA ACCGCCGGAT CTTCAACGAT CCGGCCGGGC TCGCGGCAGG GCGCAATACC
CGCTCGTTCC TGATCCAGAG CTACGCCCGC GATATGGGCG GCGGCCAGAC CGTGATGATG
CGCGAGATCG ATGTGCCGGT GCGGGTGCGC GGTCGCCACT GGGGCGGCTT CCGCACCGCC
TACAAGCTGT AA
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| Protein sequence | MAFGLFRKRS PETATLNVVA ASPPAAAEPT VAEADSAREI LELLELELGS LIRQLERAAH
SVTTGVQSTT STLHTIRERT DALTGRTSAA QTTASSFSQA ADKFTHSAHG IGAQVRQASQ
LADDASAAAD EATANVERLR DSSAAIGNVV NLISQIARQT TLLALNSTIE AARAGAAGRG
FAVVATEVKA LAVQTQEATE EIKRKIDALQ RDASSSADAV HRITSAISAI RPVFETVNGA
VAEQNATTGE IAGNATSAST FIASVGDSAA EIDSATREAE QHGDEVARAG QNVTNFAEKL
RARTAVLLKL GDREDARRRE KLPCHLQIEL DTSRGRITAP VYEISMDGVL ISGPSAAALT
TGQQLSAELQ DIGACRIRIA EHGKAGALAL FVAPDAALQS RIEDRLWAIR DENTEFVTRA
IEAGHELSKI FERGIASGAL TLEQMFDENY IEIAGTDPKQ YRTQYLDWAD RALPPFQESF
LAKDRRMAFC VMIDRNGYLP VHNKLYSQPQ RPGDVAFNTA NSRNRRIFND PAGLAAGRNT
RSFLIQSYAR DMGGGQTVMM REIDVPVRVR GRHWGGFRTA YKL
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