More than 300 homologs were found in PanDaTox collection
for query gene Rpal_1286 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  82.19 
 
 
584 aa  902    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  82.5 
 
 
583 aa  859    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  68.15 
 
 
584 aa  765    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  72.91 
 
 
584 aa  790    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  100 
 
 
583 aa  1178    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
713 aa  299  1e-79  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  50.86 
 
 
482 aa  207  3e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
495 aa  201  3e-50  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
468 aa  192  2e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
454 aa  191  4e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
448 aa  191  4e-47  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
484 aa  191  4e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
470 aa  188  3e-46  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
470 aa  184  3e-45  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  45.03 
 
 
511 aa  184  4.0000000000000006e-45  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  45.14 
 
 
470 aa  183  6e-45  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
475 aa  181  4e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
481 aa  174  3.9999999999999995e-42  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
487 aa  173  9e-42  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6192  methyl-accepting chemotaxis sensory transducer  31.02 
 
 
573 aa  169  1e-40  Methylobacterium sp. 4-46  Bacteria  normal  0.361355  normal 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  28.67 
 
 
505 aa  166  8e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  27.69 
 
 
522 aa  161  3e-38  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  27.69 
 
 
522 aa  161  4e-38  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  27.69 
 
 
522 aa  160  5e-38  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
468 aa  160  8e-38  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
476 aa  160  9e-38  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
468 aa  159  1e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  27.47 
 
 
522 aa  159  1e-37  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  36.69 
 
 
527 aa  151  3e-35  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  39.05 
 
 
534 aa  147  6e-34  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
561 aa  145  2e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  37.17 
 
 
525 aa  144  4e-33  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
578 aa  144  4e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
578 aa  144  6e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
578 aa  142  9.999999999999999e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  38.82 
 
 
524 aa  142  1.9999999999999998e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  35 
 
 
527 aa  141  3e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
561 aa  139  2e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
514 aa  137  4e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
523 aa  136  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
523 aa  136  9.999999999999999e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
523 aa  136  9.999999999999999e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  34.36 
 
 
534 aa  135  3e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  46.86 
 
 
1150 aa  133  6.999999999999999e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  37.96 
 
 
565 aa  133  7.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  42.23 
 
 
669 aa  132  2.0000000000000002e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  36.57 
 
 
681 aa  132  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
689 aa  132  2.0000000000000002e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
565 aa  131  4.0000000000000003e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  41.74 
 
 
561 aa  131  4.0000000000000003e-29  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
526 aa  130  5.0000000000000004e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
563 aa  130  6e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  34.78 
 
 
534 aa  130  7.000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
560 aa  130  7.000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
449 aa  130  7.000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  37.14 
 
 
565 aa  130  7.000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
546 aa  130  7.000000000000001e-29  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
561 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  34.87 
 
 
538 aa  130  8.000000000000001e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
672 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4064  methyl-accepting chemotaxis sensory transducer  43.35 
 
 
651 aa  130  9.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  35.82 
 
 
566 aa  130  9.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
673 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
667 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  35.57 
 
 
656 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
563 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
522 aa  129  2.0000000000000002e-28  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  39.72 
 
 
586 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
566 aa  129  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  35.09 
 
 
542 aa  129  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
696 aa  128  3e-28  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
562 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
674 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  34.21 
 
 
535 aa  127  4.0000000000000003e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2471  methyl-accepting chemotaxis sensory transducer  33.82 
 
 
718 aa  127  5e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0242034  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
563 aa  127  5e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  39.27 
 
 
716 aa  127  6e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
567 aa  127  6e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007958  RPD_3409  chemotaxis sensory transducer  43.84 
 
 
651 aa  127  6e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.304746  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  40.83 
 
 
965 aa  127  7e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  36.26 
 
 
561 aa  126  8.000000000000001e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  34.59 
 
 
561 aa  127  8.000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007958  RPD_3581  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
567 aa  126  9e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0981346  normal  0.985512 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  39.9 
 
 
682 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3616  chemotaxis sensory transducer  37.78 
 
 
305 aa  126  1e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.460138  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
561 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  35.42 
 
 
566 aa  126  1e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
563 aa  125  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  48.41 
 
 
518 aa  125  2e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
565 aa  125  2e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_007925  RPC_3476  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
641 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.640734  normal 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
563 aa  125  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
566 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
566 aa  125  2e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  31.61 
 
 
533 aa  125  3e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  40.58 
 
 
545 aa  125  3e-27  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  39.34 
 
 
565 aa  125  3e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  37.35 
 
 
714 aa  125  3e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  38.86 
 
 
736 aa  124  4e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  34.69 
 
 
561 aa  124  4e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
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