More than 300 homologs were found in PanDaTox collection
for query gene Shew185_1290 on replicon NC_009665
Organism: Shewanella baltica OS185



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  82.18 
 
 
523 aa  863    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  98.85 
 
 
522 aa  1060    Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  99.04 
 
 
522 aa  1060    Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  98.85 
 
 
522 aa  1061    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  85.63 
 
 
522 aa  926    Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  80.65 
 
 
523 aa  850    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  82.18 
 
 
523 aa  863    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  100 
 
 
522 aa  1070    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  68.99 
 
 
526 aa  622  1e-177  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  47.65 
 
 
527 aa  416  9.999999999999999e-116  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  42.69 
 
 
527 aa  409  1e-113  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
534 aa  381  1e-104  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  42.92 
 
 
525 aa  366  1e-100  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
514 aa  359  7e-98  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
546 aa  351  1e-95  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  38.51 
 
 
534 aa  338  1.9999999999999998e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  38.9 
 
 
534 aa  333  7.000000000000001e-90  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  36.91 
 
 
533 aa  329  9e-89  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  38.46 
 
 
535 aa  317  5e-85  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  39.17 
 
 
538 aa  314  2.9999999999999996e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
524 aa  308  2.0000000000000002e-82  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
698 aa  284  2.0000000000000002e-75  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  35 
 
 
695 aa  272  1e-71  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  35.86 
 
 
696 aa  263  4e-69  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
693 aa  261  3e-68  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  37.05 
 
 
693 aa  255  2.0000000000000002e-66  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  34.98 
 
 
696 aa  254  3e-66  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  33.78 
 
 
707 aa  235  1.0000000000000001e-60  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  35.81 
 
 
470 aa  231  2e-59  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
470 aa  232  2e-59  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
484 aa  224  2e-57  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
505 aa  219  7e-56  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
602 aa  219  7e-56  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  33.54 
 
 
511 aa  219  7.999999999999999e-56  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
470 aa  217  2.9999999999999998e-55  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  29.81 
 
 
495 aa  217  2.9999999999999998e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
468 aa  214  1.9999999999999998e-54  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
598 aa  211  2e-53  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
481 aa  206  7e-52  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  28.06 
 
 
715 aa  202  9e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  35.75 
 
 
598 aa  199  1.0000000000000001e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
476 aa  199  1.0000000000000001e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
468 aa  198  2.0000000000000003e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  32 
 
 
573 aa  197  3e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
468 aa  197  5.000000000000001e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  34.66 
 
 
598 aa  196  1e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  30.59 
 
 
482 aa  195  2e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  31.41 
 
 
487 aa  193  6e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
454 aa  183  8.000000000000001e-45  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
511 aa  179  1e-43  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  49.67 
 
 
578 aa  176  7e-43  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  30.26 
 
 
475 aa  175  1.9999999999999998e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  27.59 
 
 
448 aa  172  2e-41  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
578 aa  170  5e-41  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
578 aa  168  2e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  25 
 
 
525 aa  165  2.0000000000000002e-39  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  29.72 
 
 
474 aa  156  8e-37  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
480 aa  155  1e-36  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.55 
 
 
541 aa  138  3.0000000000000003e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  27.62 
 
 
583 aa  134  3.9999999999999996e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
583 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  38.91 
 
 
672 aa  131  2.0000000000000002e-29  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  25.82 
 
 
468 aa  131  2.0000000000000002e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  38 
 
 
584 aa  130  7.000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  34.63 
 
 
539 aa  129  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  36.4 
 
 
633 aa  126  7e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  36 
 
 
584 aa  126  9e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  35.69 
 
 
636 aa  126  1e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
425 aa  125  3e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
584 aa  125  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  36.41 
 
 
639 aa  124  3e-27  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  31.98 
 
 
555 aa  124  3e-27  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  36.8 
 
 
528 aa  124  4e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
570 aa  124  5e-27  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_008345  Sfri_3719  methyl-accepting chemotaxis sensory transducer  36.21 
 
 
479 aa  124  5e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0481837  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
636 aa  123  6e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01518  hypothetical protein  36.05 
 
 
674 aa  123  7e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  34.76 
 
 
541 aa  123  9e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  32.92 
 
 
666 aa  122  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
540 aa  123  9.999999999999999e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  35.74 
 
 
550 aa  123  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
716 aa  123  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  38.57 
 
 
623 aa  123  9.999999999999999e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
541 aa  122  9.999999999999999e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  31.54 
 
 
677 aa  121  1.9999999999999998e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1363  PAS  41.62 
 
 
544 aa  122  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  32.62 
 
 
533 aa  122  1.9999999999999998e-26  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_013501  Rmar_2782  methyl-accepting chemotaxis sensory transducer  34.3 
 
 
601 aa  122  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.163256  n/a   
 
 
-
 
NC_011662  Tmz1t_1988  methyl-accepting chemotaxis sensory transducer  39.23 
 
 
674 aa  122  1.9999999999999998e-26  Thauera sp. MZ1T  Bacteria  normal  0.588025  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  32.46 
 
 
392 aa  121  3e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.46 
 
 
533 aa  121  3e-26  Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_013456  VEA_004004  methyl-accepting chemotaxis protein  36.2 
 
 
663 aa  121  3e-26  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  35.45 
 
 
531 aa  121  3e-26  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  33.47 
 
 
569 aa  121  3e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1963  chemotaxis sensory transducer  36.26 
 
 
535 aa  121  3e-26  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3019  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
495 aa  121  3e-26  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00108184  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
558 aa  120  3.9999999999999996e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  33.46 
 
 
533 aa  121  3.9999999999999996e-26  Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_011313  VSAL_II0170  methyl-accepting chemotaxis protein  35.4 
 
 
543 aa  121  3.9999999999999996e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  36.73 
 
 
488 aa  120  3.9999999999999996e-26  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>