| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3399 |
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| Symbol | |
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| ID | 6117731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4158152 |
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| End bp | 4159732 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641634954 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001761762 |
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| Protein GI | 170727736 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC AAACCTTAGC TCGAACACTA TCTGTTTTTT TCGTGGTCTT TATCTGCAGC
ATGCTTTTGG CGAGTTTGCC TTGGCAGCTT AATATGCTTG TGACCAGTTT TCTGTTAGCG
CTGCTCAGTA CTTTGCTGAT GTTCCTAGTG GGACGCTGGC TCGATATAAG AGTTGAACAG
AGAGTGAGCA GAGAGACTCA AACAGCCGAG TCTAGCCATA TTAATCAGGC GACTAAGCAG
ATCAGTCTTC ACACGAGTAA GATTGCCATT GGCGCAGCCG AGGTCTCCCA CTTTATCGAT
ACTCTTAATC TCTCCATTGA AAAAAACGGT GAGAGTGCCA GCCAGATCTC TGTTGCGGCA
GAGGAGCTTA GTGTCACCAC TGGCCAGTTG AGTGATAACG CAGCCCATAT TCTCCTTCAG
GCTCAAGATG CTGAACGCTT TAGTGTTGAG GGGCGTGCTC AAGCTGAAGT GGGTGTTGAT
ACCATAGAGT CACTGAGTGT AGACATTAAT ACAGCCGCTC AGCAGGTTCA TGCGTTAAAG
GAGAAAGCTC AGAGCATTCA AAATATTACA GAGTTAATTA ACTCTGTTGC TGAGCAGACA
AACTTGCTGG CTCTAAATGC CGCTATTGAA GCGGCGCGAG CCGGTGATCA GGGACGCGGT
TTTGCAGTGG TAGCCGACGA GGTACGAAAC TTAGCAGGCA AGACTGCCCA AGCCACCGGC
GACATCGCTA AGATGCTTTT GGAGGTTAGC TCAGAGGCTG ATAGGACATC AGGTTTAATG
GAGCAGGTGG TGTGCAAAAC CTCAGGTACG GTTGAGGTGA TGGCTAAGCT TGATGTGAGT
TTCAATCAGA TCTCTTTGTC GATAGCTCAA TCTGCGGAGT CTTTGAGTCA GATGGAGGAA
GCATTGAAAG AGTCAACCAG CACCACCCAT GAGATCTCCG GCTCTGTTGC TCAGATCCAT
GACTCATTAG AGAGTACCGC AGAGCAAAGT AGTCGTGTGT CTGAACAAGC CTTCGGACTA
TCTAAAACCA CCGAAGGAAT ATTTACTGAA CTGGCAGATT TCGACACACA AACTTTAGAT
CAAAGGGTGC TTAAACAAGC CCGAGAGGGG GCGAAACAGT GTGGAGCTTT ATTGGAGGCG
GGTTTAGTGA GTGGCAAGTT TAGAGAGCAT GACCTCTTCT CTCCACAATA TCGGCCTATT
TCCAATACTG ATCCCGTTAA ATATAGCACC GAATTTGATA GTTACACAGA TAGCTGTTTT
CCCGCGGTTC AGGAGCCGAT ACTGGGGAGT CACAGGGAGA TAGTGTATGC AGGTTGTGTG
GATATGAAGG GCTACTTTCC AACCCATAAC CTCTGTTTCA GTAAAAAACT CACAGGCAAA
GCCGAGATAG ATATACTCAG TAACCGCACG AAGCGGCTTT TTGACGATCC TACTGGCATT
CGCTGCGGCC AACATACTCA AGCTGTGTTG TTACAAACCT ATAAGCGTGA CACTGGTGAG
GTGATGCACG ATCTCTCTGT GCCTATCTTT GTAAAAGGTA AACACTGGGG CGGATTTAGA
GTCGGCTTTA AGGCGACTTA A
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| Protein sequence | MAEQTLARTL SVFFVVFICS MLLASLPWQL NMLVTSFLLA LLSTLLMFLV GRWLDIRVEQ
RVSRETQTAE SSHINQATKQ ISLHTSKIAI GAAEVSHFID TLNLSIEKNG ESASQISVAA
EELSVTTGQL SDNAAHILLQ AQDAERFSVE GRAQAEVGVD TIESLSVDIN TAAQQVHALK
EKAQSIQNIT ELINSVAEQT NLLALNAAIE AARAGDQGRG FAVVADEVRN LAGKTAQATG
DIAKMLLEVS SEADRTSGLM EQVVCKTSGT VEVMAKLDVS FNQISLSIAQ SAESLSQMEE
ALKESTSTTH EISGSVAQIH DSLESTAEQS SRVSEQAFGL SKTTEGIFTE LADFDTQTLD
QRVLKQAREG AKQCGALLEA GLVSGKFREH DLFSPQYRPI SNTDPVKYST EFDSYTDSCF
PAVQEPILGS HREIVYAGCV DMKGYFPTHN LCFSKKLTGK AEIDILSNRT KRLFDDPTGI
RCGQHTQAVL LQTYKRDTGE VMHDLSVPIF VKGKHWGGFR VGFKAT
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