More than 300 homologs were found in PanDaTox collection
for query gene Swoo_3399 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  100 
 
 
526 aa  1080    Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  63.27 
 
 
522 aa  644    Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  62.98 
 
 
522 aa  634  1e-180  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  62.79 
 
 
522 aa  631  1e-179  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  65.64 
 
 
523 aa  630  1e-179  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  62.4 
 
 
522 aa  630  1e-179  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  69.47 
 
 
523 aa  631  1e-179  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  65.43 
 
 
523 aa  629  1e-179  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  62.79 
 
 
522 aa  630  1e-179  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  45.39 
 
 
527 aa  419  1e-116  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  44.65 
 
 
527 aa  421  1e-116  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
534 aa  370  1e-101  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  40.07 
 
 
514 aa  348  2e-94  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  41.15 
 
 
525 aa  342  7e-93  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  38.79 
 
 
534 aa  338  1.9999999999999998e-91  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  40.17 
 
 
534 aa  327  3e-88  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  37.21 
 
 
533 aa  322  9.999999999999999e-87  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
546 aa  321  1.9999999999999998e-86  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  39.34 
 
 
535 aa  310  5e-83  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
524 aa  310  5e-83  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  38.86 
 
 
538 aa  308  1.0000000000000001e-82  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  35.95 
 
 
698 aa  279  7e-74  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
696 aa  276  9e-73  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  34.4 
 
 
695 aa  274  3e-72  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
693 aa  260  4e-68  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  36.43 
 
 
696 aa  259  1e-67  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
470 aa  254  2.0000000000000002e-66  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
470 aa  253  5.000000000000001e-66  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  37.36 
 
 
693 aa  248  1e-64  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
707 aa  229  9e-59  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
484 aa  228  3e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
468 aa  223  7e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  32.45 
 
 
495 aa  222  9.999999999999999e-57  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  31.7 
 
 
470 aa  221  1.9999999999999999e-56  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  31 
 
 
511 aa  214  3.9999999999999995e-54  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  31.08 
 
 
505 aa  207  3e-52  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  35.51 
 
 
598 aa  204  2e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  31.69 
 
 
598 aa  205  2e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  34.33 
 
 
482 aa  202  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  29.64 
 
 
487 aa  200  5e-50  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
598 aa  199  7e-50  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
602 aa  199  1.0000000000000001e-49  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
468 aa  197  4.0000000000000005e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
476 aa  197  6e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  29.75 
 
 
468 aa  196  1e-48  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  29.06 
 
 
715 aa  195  2e-48  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
573 aa  193  7e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  34.39 
 
 
481 aa  190  5.999999999999999e-47  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  32.8 
 
 
475 aa  183  5.0000000000000004e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
454 aa  179  1e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
578 aa  171  4e-41  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  25.19 
 
 
525 aa  168  2e-40  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  29.38 
 
 
448 aa  167  5.9999999999999996e-40  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  28.65 
 
 
511 aa  162  2e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  27.43 
 
 
474 aa  160  7e-38  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
578 aa  155  1e-36  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
578 aa  156  1e-36  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_007298  Daro_0837  histidine kinase, HAMP region: chemotaxis sensory transducer  33.45 
 
 
680 aa  136  9.999999999999999e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0272085 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
533 aa  135  1.9999999999999998e-30  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
773 aa  134  3e-30  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  31.32 
 
 
558 aa  134  3.9999999999999996e-30  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
541 aa  134  5e-30  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  33.94 
 
 
392 aa  133  6e-30  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
540 aa  132  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  35.36 
 
 
677 aa  131  3e-29  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
563 aa  131  3e-29  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
583 aa  130  4.0000000000000003e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
480 aa  129  2.0000000000000002e-28  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  32.89 
 
 
638 aa  127  4.0000000000000003e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
521 aa  127  4.0000000000000003e-28  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  25.33 
 
 
468 aa  127  5e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  37.98 
 
 
636 aa  127  7e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  38.27 
 
 
533 aa  125  1e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  32.32 
 
 
637 aa  126  1e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
646 aa  125  1e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  25.63 
 
 
583 aa  126  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.8 
 
 
521 aa  125  2e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_007492  Pfl01_1630  chemotaxis sensory transducer  31.88 
 
 
541 aa  125  2e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0250136 
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
522 aa  125  2e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
549 aa  124  3e-27  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_009456  VC0395_0210  methyl-accepting chemotaxis protein  29.68 
 
 
543 aa  124  4e-27  Vibrio cholerae O395  Bacteria  decreased coverage  0.000000000000824359  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  36.86 
 
 
539 aa  124  5e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1371  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.94 
 
 
544 aa  124  5e-27  Thauera sp. MZ1T  Bacteria  normal  0.116754  n/a   
 
 
-
 
NC_009997  Sbal195_3549  methyl-accepting chemotaxis sensory transducer  31.2 
 
 
548 aa  124  6e-27  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  35.8 
 
 
648 aa  124  6e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_007492  Pfl01_2907  chemotaxis sensory transducer  30.69 
 
 
541 aa  123  7e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.300582 
 
 
-
 
NC_011663  Sbal223_3352  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
573 aa  123  7e-27  Shewanella baltica OS223  Bacteria  normal  0.729863  normal 
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
674 aa  123  9e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_009052  Sbal_0938  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
548 aa  123  9e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3424  methyl-accepting chemotaxis sensory transducer  30.92 
 
 
548 aa  123  9.999999999999999e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
547 aa  122  9.999999999999999e-27  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  29.86 
 
 
664 aa  122  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  34.77 
 
 
636 aa  122  9.999999999999999e-27  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  34.73 
 
 
638 aa  122  9.999999999999999e-27  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  28.37 
 
 
653 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  33.98 
 
 
536 aa  122  1.9999999999999998e-26  Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  33.98 
 
 
433 aa  122  1.9999999999999998e-26  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
549 aa  122  1.9999999999999998e-26  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  28.24 
 
 
700 aa  121  3e-26  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  37.5 
 
 
623 aa  121  3e-26  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
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