Gene Daro_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0561 
Symbol 
ID3568886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp623889 
End bp625406 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content58% 
IMG OID637679004 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_283788 
Protein GI71906201 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAT TCGGTAACAA CGCAGCGCTC GAAAAAATTG ACCGCGATAT TGCGGCAATC 
GCCGAGGGTT CCGCAGATTT GTCACATTCG GTCGGCACAA CCGGAAATGA TGCGGCGGGA
AGGATTTCCG GAAATATCAA CCGTTTCTTT GGGCGTGTTC GCAGCCTGAT TTCGCATTCC
CGCGAACGAA GCGTCAGCAT CGCTGCCGAT GCGGCCCGGA TGAACCAACT GGTCCAGCAG
ACGGACGATG CGGTACGCCG GCAGGAAGCC TTGGCCGCCA CGGTTTTCGA CTCAAGCAAC
CGCGTCAATC AGGCGGTTGG TGAAGTCGCC ATGAACTCCG ACGCCATCCA GTCGTCGACC
CAGAACAACC TCGACCTCGC CCAACGTTCG CTTGAGCAGA TGGAAACCGT CGCCTCGACG
ATGCGTTCGA CCAATGCCCA CATCGAACAT TTCTCGTCGA CGGTGAGCGA ACTGCACACC
AGCTCGATGA AAATCAACGA GATCGTCTCG CTGATCAACG ACATTTCCGA TCAGACCAAC
CTGCTGGCAC TGAATGCCGC CATCGAAGCT GCTCGCGCTG GTGAGGCCGG ACGTGGTTTC
GCCGTCGTCG CCGACGAAGT GCGCAAGCTG GCCGAAAAGG TCAAGACCGC CACCCAGGTG
ATCGGCCAGA ACACCCAGTC GATGATCAAT CTGGTTTCCG ACACCTCGGC CAAGACGCAA
ACCATTGTCG GCGAGGTGAC CAGGGCCAAC GGCTATATCG AAACCTCGGC CGCCGACCTG
ACGACCATGG TCGGCGATTT CAAGCAGACG ACCGAGCAGC TTGCCACTAT TTCCAGTGCC
ATCTACAACC TGCGCGAAAG CAACCAGGCC ATCCATAGCG AAGTCGAAGA AATTCGCGAT
CACTCACGCG AGATTTCCGG CCGCATGCGG CAGTGCATCG ACTCGGCCAA GACCTTGCGC
GAATCGACCG AAGACCTGCA ATGCACGCTG GCCGATTTCC GCACTGGCAA CAACATGTTC
GACACCCTGC ACGACAAGTG CACTGCATTC CGCGATGACG TCGCCGGAAT CCTCCAAAAG
CTGGCCGACC GCGGCGTGAA CATTTTCGAC CAGGCCTACA AGGAAATCCC CGGTTCGAAC
CCGAAACGCT ACACCACTGC CTACGATAAC CAGTGCGACG GCGAACTCAC CCGCCTTTAC
GATAATCTGC TGCGCGAGGT GCCTGGCCTG GTCTACTCGC TCTCCATGGA TACCAACGGC
TATGCCCCGG CCCATAACGC AGTGTTTTCC AACCCGCCGA GTGGCGATCC GGCCATCGAC
CTGGTGAAAT GCCGGCACAA GCGCATTTTC AATGACCCTG TCGGCATGAA AGGTGCGAAG
AACCAGAAAC CTTCGCTGTT CCAGACCTAT GTTCGCGACA CGGGGGAAAT CCTCGCCGAC
CTGACGATGC CGGTCATGGT CAACGGCCGC CACTGGGGCG GGGTGCGGAT CGGCTTCAAA
ACCGATCTGG TCAAGTAA
 
Protein sequence
MGLFGNNAAL EKIDRDIAAI AEGSADLSHS VGTTGNDAAG RISGNINRFF GRVRSLISHS 
RERSVSIAAD AARMNQLVQQ TDDAVRRQEA LAATVFDSSN RVNQAVGEVA MNSDAIQSST
QNNLDLAQRS LEQMETVAST MRSTNAHIEH FSSTVSELHT SSMKINEIVS LINDISDQTN
LLALNAAIEA ARAGEAGRGF AVVADEVRKL AEKVKTATQV IGQNTQSMIN LVSDTSAKTQ
TIVGEVTRAN GYIETSAADL TTMVGDFKQT TEQLATISSA IYNLRESNQA IHSEVEEIRD
HSREISGRMR QCIDSAKTLR ESTEDLQCTL ADFRTGNNMF DTLHDKCTAF RDDVAGILQK
LADRGVNIFD QAYKEIPGSN PKRYTTAYDN QCDGELTRLY DNLLREVPGL VYSLSMDTNG
YAPAHNAVFS NPPSGDPAID LVKCRHKRIF NDPVGMKGAK NQKPSLFQTY VRDTGEILAD
LTMPVMVNGR HWGGVRIGFK TDLVK