More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_3326 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_55750  putative chemotaxis transducer  67.94 
 
 
538 aa  645    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  73.46 
 
 
533 aa  776    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  73.78 
 
 
534 aa  746    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  67.54 
 
 
535 aa  654    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  100 
 
 
534 aa  1083    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  58.7 
 
 
524 aa  548  1e-155  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  45.34 
 
 
546 aa  391  1e-107  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  38.01 
 
 
523 aa  339  9e-92  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
523 aa  338  9.999999999999999e-92  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
522 aa  337  1.9999999999999998e-91  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
522 aa  338  1.9999999999999998e-91  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  37.65 
 
 
523 aa  338  1.9999999999999998e-91  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  38.51 
 
 
522 aa  337  2.9999999999999997e-91  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  38.39 
 
 
522 aa  336  5e-91  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  38.58 
 
 
522 aa  337  5e-91  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
526 aa  335  1e-90  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  37.83 
 
 
525 aa  314  1.9999999999999998e-84  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  37.44 
 
 
527 aa  301  1e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
534 aa  299  1e-79  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
514 aa  295  2e-78  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  34.95 
 
 
695 aa  293  4e-78  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  36.93 
 
 
696 aa  287  2.9999999999999996e-76  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  33.99 
 
 
527 aa  287  2.9999999999999996e-76  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  36.12 
 
 
696 aa  286  5e-76  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
698 aa  285  1.0000000000000001e-75  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
693 aa  271  2e-71  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
693 aa  268  1e-70  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
468 aa  248  2e-64  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
511 aa  246  6e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
707 aa  239  5.999999999999999e-62  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  33.26 
 
 
470 aa  239  1e-61  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
470 aa  236  6e-61  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  34.6 
 
 
470 aa  234  3e-60  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
475 aa  230  4e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  35.27 
 
 
487 aa  227  5.0000000000000005e-58  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
482 aa  225  1e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
468 aa  224  2e-57  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  32.84 
 
 
476 aa  225  2e-57  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  32.42 
 
 
468 aa  223  4.9999999999999996e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
495 aa  216  9.999999999999999e-55  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
484 aa  215  1.9999999999999998e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  32.83 
 
 
602 aa  214  3.9999999999999995e-54  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
454 aa  212  1e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  32.07 
 
 
481 aa  211  3e-53  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
598 aa  207  4e-52  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  32.01 
 
 
505 aa  204  4e-51  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  31.59 
 
 
573 aa  202  9.999999999999999e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  35.54 
 
 
598 aa  194  3e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  30.38 
 
 
715 aa  191  2e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  34.05 
 
 
598 aa  191  4e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
448 aa  188  2e-46  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
525 aa  174  5e-42  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  30.89 
 
 
511 aa  167  5.9999999999999996e-40  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
474 aa  164  3e-39  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
578 aa  158  2e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
578 aa  152  2e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  45.99 
 
 
578 aa  150  8e-35  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  28.22 
 
 
584 aa  143  6e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
533 aa  140  3.9999999999999997e-32  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  43.5 
 
 
474 aa  137  6.0000000000000005e-31  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  35.68 
 
 
584 aa  136  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
583 aa  134  3.9999999999999996e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  29.89 
 
 
480 aa  133  6.999999999999999e-30  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_011146  Gbem_0771  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
822 aa  133  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
583 aa  133  1.0000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3107  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
542 aa  132  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
533 aa  132  2.0000000000000002e-29  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  27.2 
 
 
468 aa  132  2.0000000000000002e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_007519  Dde_2734  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
751 aa  130  7.000000000000001e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0750  methyl-accepting chemotaxis protein, putative  37.45 
 
 
539 aa  129  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0821  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
545 aa  129  1.0000000000000001e-28  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000877148  hitchhiker  0.00000558474 
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
570 aa  129  2.0000000000000002e-28  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  42.37 
 
 
549 aa  127  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3045  methyl-accepting chemotaxis sensory transducer  35 
 
 
563 aa  127  4.0000000000000003e-28  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000317109  n/a   
 
 
-
 
NC_010814  Glov_1286  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
538 aa  127  4.0000000000000003e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0882  methyl-accepting chemotaxis sensory transducer  44.69 
 
 
540 aa  127  6e-28  Geobacter lovleyi SZ  Bacteria  normal  0.566239  n/a   
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  36.48 
 
 
540 aa  125  1e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
584 aa  125  1e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  42.71 
 
 
569 aa  126  1e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
713 aa  125  2e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
565 aa  125  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_011769  DvMF_2482  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.55 
 
 
673 aa  125  2e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
557 aa  125  2e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1295  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
771 aa  125  2e-27  Desulfovibrio vulgaris DP4  Bacteria  decreased coverage  0.000170719  normal  0.104593 
 
 
-
 
NC_009483  Gura_0612  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
543 aa  124  4e-27  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3058  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
518 aa  124  4e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  38.89 
 
 
544 aa  124  5e-27  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  35.47 
 
 
528 aa  123  7e-27  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
520 aa  123  7e-27  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  42.92 
 
 
541 aa  122  9.999999999999999e-27  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007517  Gmet_0529  methyl-accepting chemotaxis sensory transducer  41.88 
 
 
544 aa  122  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
544 aa  122  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_002939  GSU1041  methyl-accepting chemotaxis protein  33.07 
 
 
541 aa  122  1.9999999999999998e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.893443  n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  38.21 
 
 
540 aa  122  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0685  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
620 aa  122  1.9999999999999998e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
550 aa  122  1.9999999999999998e-26  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
558 aa  121  3e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1021  methyl-accepting chemotaxis sensory transducer  34.8 
 
 
518 aa  121  3e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  37.05 
 
 
533 aa  121  3.9999999999999996e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  39.25 
 
 
549 aa  120  3.9999999999999996e-26  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
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