More than 300 homologs were found in PanDaTox collection
for query gene RPC_4808 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  72.7 
 
 
583 aa  766    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  75.91 
 
 
583 aa  788    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  100 
 
 
584 aa  1184    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  70.03 
 
 
584 aa  758    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  71.65 
 
 
584 aa  784    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
713 aa  270  4e-71  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  52.05 
 
 
482 aa  203  7e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
468 aa  192  1e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
495 aa  190  5e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
470 aa  186  8e-46  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
511 aa  186  1.0000000000000001e-45  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  44.77 
 
 
448 aa  184  5.0000000000000004e-45  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
470 aa  182  1e-44  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  30.4 
 
 
470 aa  182  2e-44  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
454 aa  181  4e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
484 aa  171  4e-41  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
481 aa  167  4e-40  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
475 aa  165  3e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_010511  M446_6192  methyl-accepting chemotaxis sensory transducer  30.33 
 
 
573 aa  161  4e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.361355  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
487 aa  158  3e-37  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
468 aa  156  1e-36  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
468 aa  154  2.9999999999999998e-36  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
476 aa  154  2.9999999999999998e-36  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  36.65 
 
 
525 aa  147  7.0000000000000006e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  34.32 
 
 
527 aa  138  3.0000000000000003e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
524 aa  137  4e-31  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  33.88 
 
 
534 aa  135  1.9999999999999998e-30  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  36.36 
 
 
565 aa  135  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  34.64 
 
 
527 aa  133  1.0000000000000001e-29  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
523 aa  132  2.0000000000000002e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
523 aa  132  2.0000000000000002e-29  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  36.86 
 
 
542 aa  132  2.0000000000000002e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.87 
 
 
741 aa  131  3e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  38 
 
 
522 aa  131  4.0000000000000003e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  38 
 
 
522 aa  130  5.0000000000000004e-29  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  38 
 
 
522 aa  130  5.0000000000000004e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
523 aa  130  7.000000000000001e-29  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  40.79 
 
 
656 aa  130  8.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_011757  Mchl_0752  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
716 aa  129  1.0000000000000001e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.713683  normal 
 
 
-
 
NC_010505  Mrad2831_2471  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
718 aa  129  1.0000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0242034  normal 
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  37.33 
 
 
522 aa  129  1.0000000000000001e-28  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
562 aa  128  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  43.28 
 
 
669 aa  128  3e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
514 aa  128  3e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
578 aa  128  3e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  35.9 
 
 
965 aa  127  5e-28  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  36.76 
 
 
561 aa  127  5e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_010172  Mext_0809  chemotaxis sensory transducer  38 
 
 
717 aa  127  5e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  40.27 
 
 
428 aa  127  5e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  40.32 
 
 
561 aa  127  7e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  38.16 
 
 
534 aa  126  9e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  35.87 
 
 
545 aa  125  1e-27  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  38.43 
 
 
565 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
578 aa  126  1e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
673 aa  126  1e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  36.67 
 
 
691 aa  126  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  36.88 
 
 
567 aa  126  1e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  35.8 
 
 
682 aa  125  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
672 aa  125  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
578 aa  125  2e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  34.9 
 
 
670 aa  125  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
449 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
675 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  36.5 
 
 
572 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
566 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  36 
 
 
522 aa  125  2e-27  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
674 aa  125  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  38.76 
 
 
565 aa  124  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
563 aa  124  3e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  37.94 
 
 
681 aa  124  4e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  37.68 
 
 
561 aa  124  4e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
565 aa  124  5e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  36.9 
 
 
561 aa  124  5e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  42.16 
 
 
675 aa  124  5e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
730 aa  124  6e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  41.94 
 
 
565 aa  124  6e-27  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  36.99 
 
 
731 aa  124  6e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  41.94 
 
 
565 aa  124  6e-27  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_007958  RPD_3409  chemotaxis sensory transducer  37.74 
 
 
651 aa  123  7e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.304746  normal 
 
 
-
 
NC_010505  Mrad2831_3082  methyl-accepting chemotaxis sensory transducer  46.45 
 
 
556 aa  123  8e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.27714  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
904 aa  123  9e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
563 aa  123  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  39.32 
 
 
518 aa  122  9.999999999999999e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  34.62 
 
 
534 aa  122  1.9999999999999998e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0233  methyl-accepting chemotaxis sensory transducer  38.1 
 
 
563 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
566 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  39.11 
 
 
566 aa  122  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  41.04 
 
 
656 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  37.87 
 
 
566 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  32.53 
 
 
661 aa  122  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
696 aa  121  3e-26  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  36.4 
 
 
563 aa  122  3e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
688 aa  121  3e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  41.15 
 
 
667 aa  121  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
563 aa  121  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.12 
 
 
561 aa  121  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  38.15 
 
 
540 aa  121  3e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  38.21 
 
 
674 aa  122  3e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  37.08 
 
 
573 aa  121  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
858 aa  121  3e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
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