Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2939 |
Symbol | |
ID | 3740833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3325295 |
End bp | 3327385 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780231 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_385882 |
Protein GI | 78224135 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00000015868 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGTAACA GGCTCGAGTT CAAGGTGCTG GGGATTATTG GAGCAACCCT TTGCGTGGGA TTCGCCATCC TTGGTGTAAC CGCCATCTGG CTTGAATACA CCGCCCTGAT GAAACTTCAG GCTGCCAATA CCCGCGGCCT CTCAACCCTC ATCTCCCAGG AAATCGCTGA AAACATGATG TCGGGCGACA TGGCGGTGAT AAACCGATAT ATCGCACGGG TGAAAGGGAA GGGGCAGGTG CTCGACCTCA AGGTGTTCGG TCCCGCCGCA AAGCCGTGGG GGGACAAGGG CGCGGCTGCT GACCCGGTGG TTGCGGAAGC CATTGCGGCA GGCCGTGCCC GGGAACTGCG CCATACCCTG GATGACGGGA AGCATGTCCT GAGCTTTGCC GTCCCCCTGG TGAACGAGGA GCGCTGCACC ACCTGCCACG AGAAGGGAGC CCGGTACACC GGTGCGATTC TTCTCACCAC CTCGCTTCAG GATGGGTATG TCAGCGCGCG GAACCTTACC ATAGCCCTGG CTGCAACCGG CTTTGTCTTT TTCCTGATCA TGCTTGGTAC CTTGTACCTC TTCTTCCGTC AGACCATCGT GCGGAACATC CGTGAGCTGT CCGACAGGAT CCAGGTCATC GCCCACGGCG AGGGGGATCT GACCTCACAG ATGCCAGTCC GGACCGGCGA CGAGCTCGGA GAGCTTGCCG AGGGGGTCAA CATGCTGATC GCCAAGCTGC GGGAGATTGT GACATCCCTC TACAGCCAGG CGGGGCACAT CGCCATATCG GCCTGCCGCA CCGTCAAGGG GACCGAAGGG CTCGTCGCCT CTACGGCGGA ACAGAAGGAC CTTTCCACCT CGGTGGCCGT GGCGTCGGAG GAGATGTCGG CTACCCTGAA CGATGTGGCA GCCACCACCC AGCGGGCGGC GCAGCTCTCC ATTAACGTGG ATCAGGCTGC AAAAGTGGGG ATGGAGACCG TGGAGGAGAC CTCCCTGAGC ATCGACCAGA TCCGGACCAG CGTCCTCGGC ACCCTGGGAG CCATGGGGAA GCTGGAGACT TCGTCGGGGC AGATCGGCGA GATCGTGGGA ATTATCGAGG ATATCGCCGA CCAGACCAAT CTCCTGGCCC TCAACGCGGC CATCGAGGCT GCCCGGGCCG GCGATGCGGG GCGGGGCTTT GCGGTGGTGG CCAACGAAGT GAAGACCCTG TCAAATCGCA CCGCCACGTC CACAAGACAG ATCGCCGCCA TTGTCCGGAG CATCCAGGAA GAGATCGGGA CGGTGGTGAC ATCCATTGGC GAGGGGAAAA CGAGGGTTGA GGAAGGGGTC GAGAAGGCGG GGCATGCCCG CCAGCAACTG GAGGGGATCC TGCGGTTGGC GACCGATTCA ACGGACATGA TCAGCCAGAT TGCCACGGCC ACTGAGGAGC AGAGTGCCAC GACCGTCGAG ATCACGGAGA AGATCGGCCA GGTGTCGGCC ACGGCAGGGG CGGTGAACGG CCAGATGGAG GAGACGGCCC GCATCTTCCG CGAGTTGTCG GAAACAGCCG AGAAAATCTA CGGGACCGTG GGCCGGTTCA GCGTGGGGTG CTACCATGAT GCCGTCAAGG GGTATGCCGC GGAGCTGCGG GACCGGGCGA CGGCGGTCAT AGAGAAGGCC CTGGAGGACC GGAAGATCAC CATCGATGCC CTCTTCAGCA CCGATTACAC GCCGATTCCG AACACCACTC CCCAGAAGTA CCGTACCCCC TTCGACCGGT TCTTTGACGA ACTCGTCTCG CCGGTTCAGG AGGAGATCCT GGGCCGGGAC AGTGGGGTGT ACTATGCCAT CTGTGTCGAT CGCGAGGGGT ACTGCCCCTC CCACAACCTG CGCTATTCCC GCCCCCTGAC CGGCGACGTC GCCGTGGACA AGGACCACAA CCGCACCAAG CGGATCTTCA ACGACCGGAC CGGCATCCGT TGCGCCACCC ATACCCAGAG CTTTCTGCTC CAGACCTATC TGCGGGACAC GGGGGAGGTC ATGAACGACC TGTCAACGCC CATAACAGTC GGCGGGAAAC ACTGGGGAGC GGTCAGGATC GGCTACCGGG CCGACGACTG A
|
Protein sequence | MRNRLEFKVL GIIGATLCVG FAILGVTAIW LEYTALMKLQ AANTRGLSTL ISQEIAENMM SGDMAVINRY IARVKGKGQV LDLKVFGPAA KPWGDKGAAA DPVVAEAIAA GRARELRHTL DDGKHVLSFA VPLVNEERCT TCHEKGARYT GAILLTTSLQ DGYVSARNLT IALAATGFVF FLIMLGTLYL FFRQTIVRNI RELSDRIQVI AHGEGDLTSQ MPVRTGDELG ELAEGVNMLI AKLREIVTSL YSQAGHIAIS ACRTVKGTEG LVASTAEQKD LSTSVAVASE EMSATLNDVA ATTQRAAQLS INVDQAAKVG METVEETSLS IDQIRTSVLG TLGAMGKLET SSGQIGEIVG IIEDIADQTN LLALNAAIEA ARAGDAGRGF AVVANEVKTL SNRTATSTRQ IAAIVRSIQE EIGTVVTSIG EGKTRVEEGV EKAGHARQQL EGILRLATDS TDMISQIATA TEEQSATTVE ITEKIGQVSA TAGAVNGQME ETARIFRELS ETAEKIYGTV GRFSVGCYHD AVKGYAAELR DRATAVIEKA LEDRKITIDA LFSTDYTPIP NTTPQKYRTP FDRFFDELVS PVQEEILGRD SGVYYAICVD REGYCPSHNL RYSRPLTGDV AVDKDHNRTK RIFNDRTGIR CATHTQSFLL QTYLRDTGEV MNDLSTPITV GGKHWGAVRI GYRADD
|
| |