Gene Rpic_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0509 
Symbol 
ID6287792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp545486 
End bp546898 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID642624074 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001898096 
Protein GI187927609 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.856427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.10181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCAT TCGCCTGGGG CCGCGGCCCG AAAGCCTCTC CCGACCTTGT TGCCCGTATT 
GCCGAAGAGG CCGGCCGCGT CGGCATGGGC ATCTGCGAGG TCTCCGGCAA CGTGGAAGAC
GTGGCCGTGC GCCTGCGCCG GCAGGCCGAC GTGTTCGATC AGTTGCGCAA CGCGGCCGAT
GTCACCATGC GCGGCAATCA CGATATCGCC GTAGCGGCGC AGCACGCGCG CAAAGTCGCA
TCGCATGCCA GCGAAGAGGT GAGCGGCTCG CGCGAAACGG TCGATGCATC GCTGCGCGAC
ATTCGCGAGT TGGCCGTTGG TGTGGCGAGC ATGGAACAGC AGATTGCTGC ACTGCGTGAA
GCGCTGATCC AGGTGGCGCA GGCGTCCGAG CAGATTTCGC AGATTGCCAG GCAGACCAAT
CTGCTGGCAA TCAACGCCGC CATTGAAGCG GCGCGCGCGG GGGAATCGGG CCGCAGCTTT
GCAGTGGTTG CGGGCGCAGT GAAGCAGCTC GCTGGACAGA CCGCCGAAGC AACCCAGCGT
ATCGAAACCA CCTTGGCGGA TTTGTCTGGC CAGACCGACA AGCTGATCGG CGACAGCAGT
GCAAACGTTG CGCGCGCCCA GCGTGTGGAT GCCGGCACGC AGGCCATTGG CGCGGTGATT
GGCGTGGCGG GCGAGGCCAT TGCGCGCTTC GATGTCGAGG CGACCAGCAT TGCGGAATCC
ACTGCGGCCA TCGAAGACGA ATGCGCGTCG CTCGCGCGTG AGGTGGAGGC GATGGCTGAG
GGTGTGAAGC AATCGAGCCA CAACATCGAC AACGCGCAAC GGCAGCTTTC GGGGTTGCTG
GGGGCGTCGG AAACGCTGAT CCGGTTGACG GCCTCAACGG GTGTGCAGAG TGCCGATACG
CCGTTCATCG AAGCGGTGCA GACCGCCGCC GGCAAGATCA GCGCATTGTT TGAATCGGCG
CTGGCGCGCG GCGATATCAA TGAGGGCGAT TTGTTCGACC GCACCTATGC GCCTGTGCCG
AATACCGACC CGCCGCAGCA TATGACGCGG TTCACGACGT TCACGGACCG TGTGTTGCCT
GCGGTACAGG AGCCGTTGCT CCAGTTGGAT CCACGCGTGG TGTTTTGTGC GGCGGTCGAC
ACCAACGGCT ACCTTCCGAC GCACAACCTG AAGTTCTCGC AGCCGCAGGG GAGTGATCCG
GTCTTGAATG CGGCCAACAG CCGCAACCGC CGGCTGTTCA CCGATCGCAC GGGGCTGGGG
GCCGCGCGCA ATACTGAGGC ATTTTTGTTG CAGACGTATC GTCGCGATAT GGGCAACGGG
ACGTTTGCGA TGATGAAGGA TGTGTCGGCG CCGATTTACG TCAAGGGCCG TCACTGGGGT
GGTTTCCGGA TGGGCTACAA GGTGGCCGGT TAA
 
Protein sequence
MKPFAWGRGP KASPDLVARI AEEAGRVGMG ICEVSGNVED VAVRLRRQAD VFDQLRNAAD 
VTMRGNHDIA VAAQHARKVA SHASEEVSGS RETVDASLRD IRELAVGVAS MEQQIAALRE
ALIQVAQASE QISQIARQTN LLAINAAIEA ARAGESGRSF AVVAGAVKQL AGQTAEATQR
IETTLADLSG QTDKLIGDSS ANVARAQRVD AGTQAIGAVI GVAGEAIARF DVEATSIAES
TAAIEDECAS LAREVEAMAE GVKQSSHNID NAQRQLSGLL GASETLIRLT ASTGVQSADT
PFIEAVQTAA GKISALFESA LARGDINEGD LFDRTYAPVP NTDPPQHMTR FTTFTDRVLP
AVQEPLLQLD PRVVFCAAVD TNGYLPTHNL KFSQPQGSDP VLNAANSRNR RLFTDRTGLG
AARNTEAFLL QTYRRDMGNG TFAMMKDVSA PIYVKGRHWG GFRMGYKVAG