More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_2304 on replicon NC_010681
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  76.65 
 
 
470 aa  729    Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  100 
 
 
468 aa  946    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  70.78 
 
 
468 aa  650    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  93.16 
 
 
511 aa  879    Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  71 
 
 
476 aa  651    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  71 
 
 
468 aa  652    Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  57.57 
 
 
470 aa  522  1e-147  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  56.93 
 
 
470 aa  513  1e-144  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  47.11 
 
 
482 aa  405  1.0000000000000001e-112  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
475 aa  396  1e-109  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  45.72 
 
 
484 aa  392  1e-108  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  41.99 
 
 
487 aa  362  8e-99  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
495 aa  357  1.9999999999999998e-97  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
448 aa  307  2.0000000000000002e-82  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  38.48 
 
 
481 aa  303  4.0000000000000003e-81  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  39.43 
 
 
474 aa  290  3e-77  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  37.55 
 
 
454 aa  284  3.0000000000000004e-75  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
468 aa  270  5e-71  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  36.08 
 
 
534 aa  248  1e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  36.4 
 
 
534 aa  246  6e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
524 aa  241  2e-62  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  35.63 
 
 
533 aa  233  5e-60  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
514 aa  226  6e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  32.75 
 
 
527 aa  226  1e-57  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  30.02 
 
 
526 aa  223  6e-57  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
546 aa  223  7e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  31.8 
 
 
525 aa  219  6e-56  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  32.61 
 
 
538 aa  219  6e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  31.86 
 
 
535 aa  218  2e-55  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
522 aa  216  7e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  32.57 
 
 
522 aa  214  1.9999999999999998e-54  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  32.99 
 
 
522 aa  214  1.9999999999999998e-54  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  32.36 
 
 
522 aa  214  2.9999999999999995e-54  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
523 aa  211  2e-53  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  30.06 
 
 
522 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
523 aa  209  8e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  32.05 
 
 
534 aa  209  9e-53  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
523 aa  209  1e-52  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  32.68 
 
 
527 aa  207  3e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
696 aa  207  3e-52  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  30.79 
 
 
698 aa  206  7e-52  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
707 aa  204  4e-51  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  31.86 
 
 
695 aa  202  8e-51  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
584 aa  197  2.0000000000000003e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  32.53 
 
 
693 aa  198  2.0000000000000003e-49  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  31.69 
 
 
696 aa  195  1e-48  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  28.19 
 
 
480 aa  195  2e-48  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  47.95 
 
 
583 aa  192  1e-47  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
584 aa  192  1e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  32.43 
 
 
693 aa  192  1e-47  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
583 aa  192  2e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
713 aa  190  5e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  46.2 
 
 
584 aa  189  1e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_008789  Hhal_0534  methyl-accepting chemotaxis sensory transducer  32.24 
 
 
439 aa  188  2e-46  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  32.78 
 
 
505 aa  159  1e-37  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  28.07 
 
 
715 aa  156  8e-37  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  28.18 
 
 
598 aa  154  2.9999999999999998e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
602 aa  146  7.0000000000000006e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  26.79 
 
 
598 aa  140  3.9999999999999997e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_009483  Gura_4170  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
578 aa  140  7e-32  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  27.46 
 
 
598 aa  139  1e-31  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  28.31 
 
 
573 aa  137  3.0000000000000003e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
578 aa  126  8.000000000000001e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_010511  M446_6192  methyl-accepting chemotaxis sensory transducer  41.71 
 
 
573 aa  126  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.361355  normal 
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  25.9 
 
 
525 aa  125  2e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
578 aa  124  4e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  27.92 
 
 
511 aa  121  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6711  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
568 aa  112  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  29.65 
 
 
578 aa  98.6  2e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
533 aa  97.8  4e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  33.62 
 
 
636 aa  95.9  1e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
554 aa  96.3  1e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
633 aa  93.6  6e-18  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  30 
 
 
578 aa  93.2  9e-18  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0696  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.46 
 
 
659 aa  92  2e-17  Petrotoga mobilis SJ95  Bacteria  normal  0.738999  n/a   
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
647 aa  91.3  3e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
555 aa  91.7  3e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
688 aa  90.9  5e-17  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
554 aa  90.5  6e-17  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
533 aa  90.1  7e-17  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009831  Ssed_0529  methyl-accepting chemotaxis protein-like protein  28.08 
 
 
677 aa  89.7  1e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  30.21 
 
 
716 aa  89.4  1e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009253  Dred_2857  methyl-accepting chemotaxis sensory transducer  31.17 
 
 
520 aa  89.4  1e-16  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.000607785  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
554 aa  89.4  1e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
564 aa  89.4  1e-16  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1582  methyl-accepting chemotaxis sensory transducer  29.7 
 
 
678 aa  89.7  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.85269 
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
631 aa  88.6  2e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2188  histidine kinase  27.95 
 
 
540 aa  89  2e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.035953  normal 
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  30.13 
 
 
653 aa  88.6  2e-16  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  28.96 
 
 
554 aa  88.6  2e-16  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2050  methyl-accepting chemotaxis protein  27.51 
 
 
704 aa  88.2  3e-16  Colwellia psychrerythraea 34H  Bacteria  normal  0.459277  n/a   
 
 
-
 
NC_010505  Mrad2831_0496  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
838 aa  88.2  3e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.421547 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  28.93 
 
 
554 aa  88.2  3e-16  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0103  methyl-accepting chemotaxis protein  35.8 
 
 
521 aa  88.2  3e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  27.74 
 
 
653 aa  87.8  4e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  29.47 
 
 
697 aa  87.4  4e-16  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  28.96 
 
 
554 aa  87.8  4e-16  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
637 aa  87.8  4e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  31.13 
 
 
632 aa  87.4  5e-16  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
554 aa  87.4  5e-16  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
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