| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3409 |
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| Symbol | |
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| ID | 4023922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3791641 |
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| End bp | 3793596 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637963614 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_570534 |
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| Protein GI | 91977875 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.304746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAT CGATTTCGGC GCGGATGATC GTCGCGATCA TTCTTGTGGC GATCGGGTCG
TGCGCCATGC TGGCTGGCTT CAGCTTTTGG CGGCAACAGG CGACGATCGA TGTCGCGCTG
GAACGCGAAC TACGTTCCGA CTATGCCAAT CTCATCGGCG CGCTCGAGGC GGAGACCCGT
ACGACGCTGG CTGTCAGCGA AACCATCGCG GCCATGCAGG CCGTGAAGGA GGTCGTCCGC
GCCGGCGATC GCAATGCCGT ATTGAAGATA TTGAAGGAAG CTCACTCCAA ACTTGCTCCA
CGCGGCCTCG ATTTGGTCAC CGTCCAGGTT CCGCCGGCAA CGACGCTTAT GCGTATCCAC
AAGCCGGATT CGTTCGGTGA TAACGTCGCC GATCGCCGCA AGATGGTGGT CGATACGCTG
TCATTGGCCA AGTCCCATGG CGGCATCGAG CCGGGTGCAG ACAGCCTGAC CGTGTTCGGC
ACCAGTCCGA TCGTCGACGA CAAGGGGCTG GTCGGCACCG TGGATGTTGG GACGCCGTTC
GGAAAGAACT TCGTCGAGCG GATGAAGGCC AGGTTCCAGG TCGATGTCGC GATCCTGCAG
CCGACCGCCG CGGGCGTGAA AGTGATTGCG TCATCGATTC CCGGCCTGAC GCCGGATGTC
GACGCGATCC GCCGCGCGAT GGCGGGCGAA TTGGTGATCC GCAAGAGCGA GGATGGCGGC
AAGACGACGG GCATGACCTT CGGCCAGATC AAGAAGTTCT CGGGCGAGCC GATCGCGGTG
CTGCAGATCG TGCGCGACGC CACCGCCTAT TCCGCGCTCA CGACGGGCGC GCTGCAATGG
CTTGGACTGG CGACGCTCGG CGCGGCGCTG GCCGCAGCTG TGGTCGCGAT CTGGCTCGGC
CGCGGCATGG CGAAGCCGAT CCGGGCGCTG GAAGGAGCGA TGTCCGAGAT CATCCAGGGC
CGCCACGCCG TTCTGGTGCC GGGCTGCGAC CGCCGTGACG AGGTCGGTTC GATGGCTCGC
ACCGTCGAAC TGTTCAAGGA AAGCCTGATC GAAACCGAGC GTCTGCGTGC GGCGCAGGAT
CAGCAGCGCA TCGCCCATGA AAACGAACGG CGCCAGACGA TGCTGGAACT CGCCGCGCGG
TTCGAATCCA ACGTCGGTGG CGTGGTCGAA CTGGTCAGCT CGGCGGCAAC GGAACTCCGC
GGCACGGCGG ATTCGATGGC CGGCACCGCG AAGGAATCCG AGCGGCGGAT CATTGCGGCG
ACCGCCGCTT CGACGCAGGC GACTTCGAAC GCGCAGGCGG TCGCCGCCGC GGTGGAGCAA
CTCGACGCTT CGATTGCCGA AATCGGCAAA CATGTCGATC AGTCGGCCCA CGTCGCGAGC
GAGGCAGCCA ACCAGGCGGG CCGCACCAAT GCGGAGGTGA AGGGGCTCGC GGAAGCCGCG
CAGAAGATCG GCGAGGTGGT GACGCTGATC AGCGACATTG CCGCGCAGAC CAATCTGCTG
GCGCTGAACG CCACCATCGA GGCGGCGCGG GCCGGTGAAG CCGGCCGCGG CTTCGCGGTG
GTTGCCGCCG AGGTCAAGGC GCTGGCCGAA CAGACATCGA AAGCGACCGA GGAAATATCC
TCGCAGATCG GCTCGATCCA GTCTGCGACG CAAAGCTCGG CAACGGCGAT CGAGGGCATC
ACCACCATCA TCGGCCGCGT CAACGAAATC GCCACGGCAA TCGCTAGCGC GGTGCGCGAA
CAGGGCACTG CGACGCGTGA GATCGCGCAC AACGTCGCCG AGGCCGCCCG GTCCACCAGC
GAAGTCTCGA GCAACATCGG CGGCGTTCAC GATGCGGCGC GCGAGACCGG CGTGGCTGCC
GGTCAGGTCG TCGAATCCGC GAGCGAATTG TCGCGCACCG GCGAAACACT GAAGACTCAG
GTCGAGACGT TCTTGCGCGA AGTCCGCGCT GCCTGA
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| Protein sequence | MLKSISARMI VAIILVAIGS CAMLAGFSFW RQQATIDVAL ERELRSDYAN LIGALEAETR
TTLAVSETIA AMQAVKEVVR AGDRNAVLKI LKEAHSKLAP RGLDLVTVQV PPATTLMRIH
KPDSFGDNVA DRRKMVVDTL SLAKSHGGIE PGADSLTVFG TSPIVDDKGL VGTVDVGTPF
GKNFVERMKA RFQVDVAILQ PTAAGVKVIA SSIPGLTPDV DAIRRAMAGE LVIRKSEDGG
KTTGMTFGQI KKFSGEPIAV LQIVRDATAY SALTTGALQW LGLATLGAAL AAAVVAIWLG
RGMAKPIRAL EGAMSEIIQG RHAVLVPGCD RRDEVGSMAR TVELFKESLI ETERLRAAQD
QQRIAHENER RQTMLELAAR FESNVGGVVE LVSSAATELR GTADSMAGTA KESERRIIAA
TAASTQATSN AQAVAAAVEQ LDASIAEIGK HVDQSAHVAS EAANQAGRTN AEVKGLAEAA
QKIGEVVTLI SDIAAQTNLL ALNATIEAAR AGEAGRGFAV VAAEVKALAE QTSKATEEIS
SQIGSIQSAT QSSATAIEGI TTIIGRVNEI ATAIASAVRE QGTATREIAH NVAEAARSTS
EVSSNIGGVH DAARETGVAA GQVVESASEL SRTGETLKTQ VETFLREVRA A
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