More than 300 homologs were found in PanDaTox collection
for query gene Bcen2424_5378 on replicon NC_008543
Organism: Burkholderia cenocepacia HI2424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008061  Bcen_2988  short-chain dehydrogenase/reductase SDR  99.51 
 
 
245 aa  405  1.0000000000000001e-112  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5378  short-chain dehydrogenase/reductase SDR  100 
 
 
205 aa  404  1.0000000000000001e-112  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4892  short-chain dehydrogenase/reductase SDR  99.51 
 
 
245 aa  405  1.0000000000000001e-112  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4739  short-chain dehydrogenase/reductase SDR  90.73 
 
 
245 aa  376  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  0.93473  normal  0.931681 
 
 
-
 
NC_010505  Mrad2831_3756  short-chain dehydrogenase/reductase SDR  74.15 
 
 
244 aa  281  5.000000000000001e-75  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0174696 
 
 
-
 
NC_007511  Bcep18194_B2086  Short-chain dehydrogenase/reductase SDR  43.41 
 
 
245 aa  140  9.999999999999999e-33  Burkholderia sp. 383  Bacteria  decreased coverage  0.00879174  normal  0.332592 
 
 
-
 
NC_002939  GSU0802  short chain dehydrogenase  41.3 
 
 
238 aa  135  4e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.414553  n/a   
 
 
-
 
NC_012850  Rleg_2533  short-chain dehydrogenase/reductase SDR  36.41 
 
 
243 aa  120  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2913  Short-chain dehydrogenase/reductase SDR  39.34 
 
 
234 aa  114  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.98827 
 
 
-
 
NC_010623  Bphy_5398  short chain dehydrogenase  39.33 
 
 
237 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.448232  normal  0.960589 
 
 
-
 
NC_007777  Francci3_2624  short-chain dehydrogenase/reductase SDR  38.29 
 
 
239 aa  110  2.0000000000000002e-23  Frankia sp. CcI3  Bacteria  normal  normal  0.0910719 
 
 
-
 
NC_011369  Rleg2_2087  short chain dehydrogenase  33.51 
 
 
245 aa  110  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.319948  normal  0.613238 
 
 
-
 
NC_010511  M446_3511  short chain dehydrogenase  40.22 
 
 
237 aa  110  2.0000000000000002e-23  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2324  short chain dehydrogenase  33.33 
 
 
245 aa  109  3e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06495  oxidoreductase  33.33 
 
 
222 aa  108  5e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008390  Bamb_1352  short chain dehydrogenase  35.03 
 
 
204 aa  108  7.000000000000001e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.297804  n/a   
 
 
-
 
NC_007434  BURPS1710b_1880  short chain dehydrogenase  39.33 
 
 
270 aa  107  1e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0386097  n/a   
 
 
-
 
NC_009076  BURPS1106A_1727  short chain dehydrogenase  39.89 
 
 
240 aa  107  1e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  0.169393  n/a   
 
 
-
 
NC_006348  BMA1106  short chain dehydrogenase  39.33 
 
 
240 aa  106  2e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  0.256004  n/a   
 
 
-
 
NC_009080  BMA10247_0953  short chain dehydrogenase  39.33 
 
 
240 aa  106  2e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1548  short chain dehydrogenase  39.33 
 
 
240 aa  106  2e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0211  short chain dehydrogenase  39.33 
 
 
240 aa  106  2e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0327074  n/a   
 
 
-
 
NC_009074  BURPS668_1701  short chain dehydrogenase  39.89 
 
 
240 aa  106  3e-22  Burkholderia pseudomallei 668  Bacteria  normal  0.553815  n/a   
 
 
-
 
NC_010508  Bcenmc03_1445  short chain dehydrogenase  37.29 
 
 
237 aa  105  5e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.109689  normal 
 
 
-
 
NC_008060  Bcen_0985  short chain dehydrogenase  37.29 
 
 
237 aa  105  6e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1467  short chain dehydrogenase  37.29 
 
 
237 aa  105  6e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1392  short chain dehydrogenase  36.16 
 
 
237 aa  104  8e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.663645  normal 
 
 
-
 
NC_009720  Xaut_1592  short chain dehydrogenase  36.69 
 
 
236 aa  104  8e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  0.512946  normal 
 
 
-
 
NC_007651  BTH_I2606  short chain dehydrogenase  37.29 
 
 
240 aa  103  2e-21  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1079  short-chain dehydrogenase/reductase SDR  34.3 
 
 
237 aa  94.4  1e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.236839  normal 
 
 
-
 
NC_013131  Caci_7193  short-chain dehydrogenase/reductase SDR  36.22 
 
 
250 aa  92  5e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.839106  normal 
 
 
-
 
NC_009675  Anae109_3655  short-chain dehydrogenase/reductase SDR  38.6 
 
 
259 aa  90.5  1e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.429144  normal 
 
 
-
 
NC_013132  Cpin_3482  short-chain dehydrogenase/reductase SDR  31.69 
 
 
248 aa  90.5  2e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0074  short-chain dehydrogenase/reductase SDR  39.78 
 
 
246 aa  89.7  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4560  short-chain dehydrogenase/reductase SDR  34.07 
 
 
241 aa  87.4  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.84586  normal 
 
 
-
 
NC_012853  Rleg_5752  short-chain dehydrogenase/reductase SDR  31.69 
 
 
248 aa  85.9  4e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.213287  normal 
 
 
-
 
NC_007760  Adeh_3131  short chain dehydrogenase  34.09 
 
 
250 aa  85.9  4e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.351639  n/a   
 
 
-
 
NC_010682  Rpic_2173  short-chain dehydrogenase/reductase SDR  35.29 
 
 
237 aa  85.5  5e-16  Ralstonia pickettii 12J  Bacteria  normal  0.129059  normal  0.0371904 
 
 
-
 
NC_012856  Rpic12D_1849  short-chain dehydrogenase/reductase SDR  35.29 
 
 
237 aa  85.5  5e-16  Ralstonia pickettii 12D  Bacteria  normal  hitchhiker  0.00951861 
 
 
-
 
NC_011369  Rleg2_3279  short-chain dehydrogenase/reductase SDR  34.81 
 
 
238 aa  85.1  7e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.996874 
 
 
-
 
NC_011145  AnaeK_3239  short chain dehydrogenase  34.09 
 
 
245 aa  84.7  8e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.161967  n/a   
 
 
-
 
NC_011891  A2cp1_3062  short-chain dehydrogenase/reductase SDR  33.52 
 
 
238 aa  84.7  8e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2958  short-chain dehydrogenase/reductase SDR  33.52 
 
 
238 aa  84.3  0.000000000000001  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3326  short chain dehydrogenase  43.33 
 
 
246 aa  84.3  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3578  short-chain dehydrogenase/reductase SDR  35.67 
 
 
238 aa  82.8  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.261739  normal  0.184222 
 
 
-
 
NC_013131  Caci_5080  short chain dehydrogenase  35.87 
 
 
240 aa  82.4  0.000000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.172125 
 
 
-
 
NC_013132  Cpin_6186  short-chain dehydrogenase/reductase SDR  27.36 
 
 
246 aa  80.9  0.00000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.139456 
 
 
-
 
NC_008528  OEOE_0938  Short-chain alcohol dehydrogenase  29.52 
 
 
242 aa  80.9  0.00000000000001  Oenococcus oeni PSU-1  Bacteria  hitchhiker  0.00746042  n/a   
 
 
-
 
NC_008578  Acel_1040  short-chain dehydrogenase/reductase SDR  30.94 
 
 
231 aa  76.6  0.0000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.268207  normal  0.0555085 
 
 
-
 
NC_009077  Mjls_1513  short-chain dehydrogenase/reductase SDR  36.2 
 
 
256 aa  76.3  0.0000000000003  Mycobacterium sp. JLS  Bacteria  normal  0.71611  normal 
 
 
-
 
NC_008146  Mmcs_1542  short-chain dehydrogenase/reductase SDR  36.2 
 
 
256 aa  76.3  0.0000000000003  Mycobacterium sp. MCS  Bacteria  normal  0.694275  n/a   
 
 
-
 
NC_008705  Mkms_1565  short-chain dehydrogenase/reductase SDR  36.2 
 
 
256 aa  76.3  0.0000000000003  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3841  short-chain dehydrogenase/reductase SDR  33.33 
 
 
249 aa  75.9  0.0000000000004  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.650053 
 
 
-
 
NC_012858  Rleg_6841  short-chain dehydrogenase/reductase SDR  32.81 
 
 
241 aa  75.1  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.183827 
 
 
-
 
NC_010676  Bphyt_6696  short-chain dehydrogenase/reductase SDR  46.15 
 
 
249 aa  74.7  0.0000000000009  Burkholderia phytofirmans PsJN  Bacteria  normal  0.13982  normal 
 
 
-
 
NC_011368  Rleg2_4705  short-chain dehydrogenase/reductase SDR  35.26 
 
 
245 aa  73.9  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0218272  normal  0.740514 
 
 
-
 
NC_013947  Snas_0159  short-chain dehydrogenase/reductase SDR  33.33 
 
 
253 aa  72.8  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.501988  normal 
 
 
-
 
NC_011725  BCB4264_A2546  short chain dehydrogenase  25.99 
 
 
238 aa  72.8  0.000000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4659  short-chain dehydrogenase/reductase SDR  32.81 
 
 
277 aa  72.4  0.000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_2386  short-chain dehydrogenase/reductase SDR  27.22 
 
 
238 aa  72.4  0.000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.290784  n/a   
 
 
-
 
NC_011772  BCG9842_B2779  short chain dehydrogenase  25.99 
 
 
238 aa  72  0.000000000006  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000000967722 
 
 
-
 
NC_007802  Jann_3776  short-chain dehydrogenase/reductase SDR  34.36 
 
 
259 aa  71.6  0.000000000007  Jannaschia sp. CCS1  Bacteria  normal  0.0749847  normal 
 
 
-
 
NC_013739  Cwoe_0558  short-chain dehydrogenase/reductase SDR  33.49 
 
 
269 aa  71.6  0.000000000008  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1941  short-chain dehydrogenase/reductase SDR  34.82 
 
 
258 aa  71.2  0.000000000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.663609 
 
 
-
 
NC_004578  PSPTO_4082  oxidoreductase, short chain dehydrogenase/reductase family  29.41 
 
 
244 aa  71.2  0.000000000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.858342  n/a   
 
 
-
 
NC_007005  Psyr_3821  Short-chain dehydrogenase/reductase SDR  29.41 
 
 
244 aa  70.5  0.00000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  hitchhiker  0.00400497 
 
 
-
 
NC_009338  Mflv_2071  short-chain dehydrogenase/reductase SDR  33.01 
 
 
258 aa  70.1  0.00000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.70228  normal  0.023925 
 
 
-
 
NC_007912  Sde_3393  2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase  27.78 
 
 
248 aa  70.5  0.00000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.453301 
 
 
-
 
NC_010468  EcolC_1649  short-chain dehydrogenase/reductase SDR  29.91 
 
 
250 aa  70.5  0.00000000002  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.0000150236 
 
 
-
 
NC_007974  Rmet_4327  putative short chain dehydrogenase  41.67 
 
 
140 aa  70.1  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5682  short-chain dehydrogenase/reductase SDR  31.86 
 
 
239 aa  70.5  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0981  2-deoxy-d-gluconate 3-dehydrogenase, putative  31.77 
 
 
249 aa  69.3  0.00000000003  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0265  short-chain dehydrogenase/reductase SDR  36.26 
 
 
243 aa  69.7  0.00000000003  Methylobacterium extorquens PA1  Bacteria  normal  0.395731  normal 
 
 
-
 
NC_010510  Mrad2831_6036  short-chain dehydrogenase/reductase SDR  35.67 
 
 
243 aa  69.7  0.00000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.191154 
 
 
-
 
NC_009504  BOV_A0918  putative 2-deoxy-d-gluconate 3-dehydrogenase  31.77 
 
 
249 aa  69.3  0.00000000003  Brucella ovis ATCC 25840  Bacteria  normal  0.311873  n/a   
 
 
-
 
NC_013926  Aboo_0217  short-chain dehydrogenase/reductase SDR  30.23 
 
 
240 aa  69.7  0.00000000003  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_009720  Xaut_1623  short-chain dehydrogenase/reductase SDR  34.97 
 
 
246 aa  69.7  0.00000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.502399  normal 
 
 
-
 
NC_014230  CA2559_11298  short chain dehydrogenase  36.92 
 
 
232 aa  68.9  0.00000000005  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3256  malate/L-lactate dehydrogenase  30.21 
 
 
247 aa  68.2  0.00000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0180309  normal  0.2268 
 
 
-
 
NC_009077  Mjls_4347  short-chain dehydrogenase/reductase SDR  31.89 
 
 
256 aa  68.2  0.00000000007  Mycobacterium sp. JLS  Bacteria  normal  normal  0.206497 
 
 
-
 
NC_014148  Plim_3181  short-chain dehydrogenase/reductase SDR  33.74 
 
 
260 aa  68.2  0.00000000007  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.100274  n/a   
 
 
-
 
NC_008146  Mmcs_4116  short-chain dehydrogenase/reductase SDR  31.89 
 
 
256 aa  68.2  0.00000000008  Mycobacterium sp. MCS  Bacteria  normal  0.165575  n/a   
 
 
-
 
NC_008705  Mkms_4191  short-chain dehydrogenase/reductase SDR  31.89 
 
 
256 aa  68.2  0.00000000008  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7589  Short-chain dehydrogenase/reductase SDR  29.8 
 
 
258 aa  68.2  0.00000000009  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3982  short-chain dehydrogenase/reductase SDR  30.2 
 
 
251 aa  68.2  0.00000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.437087  decreased coverage  0.00119468 
 
 
-
 
NC_004311  BRA0030  3-oxoacyl-(acyl-carrier-protein) reductase, putative  31.28 
 
 
245 aa  67.4  0.0000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2231  short-chain dehydrogenase/reductase SDR  33.68 
 
 
253 aa  67.8  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0325  3-ketoacyl-(acyl-carrier-protein) reductase  33.12 
 
 
243 aa  67.8  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.992211 
 
 
-
 
NC_009656  PSPA7_5888  putative short-chain dehydrogenase  29.41 
 
 
245 aa  67.8  0.0000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1217  short-chain dehydrogenase/reductase SDR  35 
 
 
262 aa  67.8  0.0000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0000350545  n/a   
 
 
-
 
NC_013205  Aaci_1344  3-oxoacyl-(acyl-carrier-protein) reductase  32.29 
 
 
246 aa  67.8  0.0000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.118162  n/a   
 
 
-
 
NC_013132  Cpin_4605  short-chain dehydrogenase/reductase SDR  32.27 
 
 
255 aa  67.4  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.350123  normal 
 
 
-
 
NC_011083  SeHA_C3253  3-oxoacyl-(acyl-carrier-protein) reductase  28.97 
 
 
250 aa  67.4  0.0000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.152872  normal  0.595682 
 
 
-
 
NC_008463  PA14_68040  putative short-chain dehydrogenase  29.41 
 
 
245 aa  67.4  0.0000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.915385  normal  0.0126935 
 
 
-
 
NC_007005  Psyr_4922  short chain dehydrogenase  34.71 
 
 
248 aa  66.6  0.0000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0052  short-chain dehydrogenase/reductase SDR  34.72 
 
 
259 aa  67  0.0000000002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2362  short-chain dehydrogenase/reductase SDR  42.16 
 
 
249 aa  67  0.0000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.876035 
 
 
-
 
NC_003910  CPS_1680  short chain dehydrogenase/reductase family oxidoreductase  28.25 
 
 
251 aa  66.2  0.0000000003  Colwellia psychrerythraea 34H  Bacteria  normal  0.447885  n/a   
 
 
-
 
NC_013132  Cpin_1759  short-chain dehydrogenase/reductase SDR  31.58 
 
 
250 aa  66.2  0.0000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.880714  normal 
 
 
-
 
NC_013132  Cpin_4257  short-chain dehydrogenase/reductase SDR  34.98 
 
 
256 aa  66.2  0.0000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.945101  normal  0.897274 
 
 
-
 
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