| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3131 |
|---|
| Symbol | |
|---|
| ID | 3889150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3570771 |
|---|
| End bp | 3571523 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637864680 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_466337 |
|---|
| Protein GI | 86159552 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.351639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCGT GCATGACGAC GACGACTGGG GCCGGGCTGA AGGATCGGAC GGTGGTGGTG
GTGGGCGGCG GGTCGGGCAT CGGCCTCGCG GTGGCGCGGG AGGCGCTGGC GCGCGGCGCG
GAGGTGGTGC TGGCGGGGCG CTCCCGGGAG CGCCTGGCGC GCGCGCTGGG AGCGCTCGGC
GCCGGCGCGC GGGCGCGGGC CGTCGCGGCC GACGTCCGCC AGGAGGACGC GGTGGTGCGC
CTGTTCCGGG AGGTCCCCGC CGCCGACCAC GTGGTCGCGA CGGCGGTCGT GCCCGCGTAC
CAGCCCATCG CCGCGTTCGA CCTCGAGGCG GCCCGCGCGG TGGTGGACTC GAAGCTGCTC
GGCGCGCTGC TGCTCGCGAA GCACGGGGCG CCCAGGCTGC GGCCGGGCGG CTCGCTCACG
TTCACCACCG GGATCGCCGC GGATCGCCCG ATGCCGCGGG GCTCGGTGAT CGCCGCCGTG
AACGGCGCGC TGGCCGCCTT CGTGCGGGCC GCGGCGCTGG AGCTCGCCCC GCTGCGGGTG
AACGCGCTCT CGCCCGGGTG GGTGGACACG GAGATCTGGG ACGCGGTCGC CGGCGACGGC
AAGGCGGCGA CGTTCGCCGC GATGGCCGAG CGGCTCCCCG CCCGCCGGAT CGGGCGGCCG
GAGGACGTCG CCCACGCCGC CGCGTTCCTG ATGGAGAACG GCTTCACCAC CGGGAGCGTG
CTCCGGGTGG ACGGGGGGCA TCCGCTGGTC TAG
|
|---|
| Protein sequence | MVACMTTTTG AGLKDRTVVV VGGGSGIGLA VAREALARGA EVVLAGRSRE RLARALGALG
AGARARAVAA DVRQEDAVVR LFREVPAADH VVATAVVPAY QPIAAFDLEA ARAVVDSKLL
GALLLAKHGA PRLRPGGSLT FTTGIAADRP MPRGSVIAAV NGALAAFVRA AALELAPLRV
NALSPGWVDT EIWDAVAGDG KAATFAAMAE RLPARRIGRP EDVAHAAAFL MENGFTTGSV
LRVDGGHPLV
|
|---|
| |