Gene Rleg_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_2324 
Symbol 
ID8015671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp2326452 
End bp2327189 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content64% 
IMG OID644824908 
Productshort chain dehydrogenase 
Protein accessionYP_002976138 
Protein GI241205042 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA TCAGGATCGA AGGCGCGAGG ATCATTATTG TTGGCGGCAG TTCCGGAATG 
GGGCTGGCGC TGGCGAGGCG CTTGCTCGGG GAAGGGGCGG CGGTAACGAT CGCAGGACGC
AGTGAAGATA AGCTAGCGGC GGCCCGCCGC GATCTCGGCG AGCATCCTGG ATTGGCGACG
GTCGCCGTTG ATATATCGCG CGAGGAAGAG GTCGCGACGC TGTTCCGCAA TAGTGGGCGG
GTCGATCACA TCGTCAGCAC GGCGGCCGAT ATCGAAGGCG CCTATCAGCT ACTGCCTAAG
ATCGAGCTTG CGGCGGCGCA AAGGGTGGTC GAAAGCAAAA TCTACGGGCC GCTGCTGCTG
GCAAAATATG GTGCCGCCCA TTTGCCGCCG TCAGGATCGA TCACCTATAC GTCAGGTGTC
GCGGCCTACC GGCCGGCGGC GCGTGGATCG GTGGTCGCAG CCGTCAATGC GGCGCTCGAA
GGCATGGTCA GGGCGCTTGC TGTTGAACTG GCGCCGATCC GGATCAACGC GGTGTCGCCC
GGATGGGTGG ACACGCCGAT CTGGAGCTTC GTCGCCGGCG AGGCCAAGCA GGCAACGCTT
GATGCGATGG CACAGCGCCT GCCGGCCGGA CGCGTTGGAC GGCCCGATGA TATTGCCGAT
GCGATCCGCT TCCTGATCGG CAACGGCTTC ACGACAGGCA CTATCCTGCA TGTCGAAGGC
GGGCATCGGC TGGTCTGA
 
Protein sequence
MTDIRIEGAR IIIVGGSSGM GLALARRLLG EGAAVTIAGR SEDKLAAARR DLGEHPGLAT 
VAVDISREEE VATLFRNSGR VDHIVSTAAD IEGAYQLLPK IELAAAQRVV ESKIYGPLLL
AKYGAAHLPP SGSITYTSGV AAYRPAARGS VVAAVNAALE GMVRALAVEL APIRINAVSP
GWVDTPIWSF VAGEAKQATL DAMAQRLPAG RVGRPDDIAD AIRFLIGNGF TTGTILHVEG
GHRLV