| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3776 |
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| Symbol | |
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| ID | 3936256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3860660 |
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| End bp | 3861439 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637906154 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511718 |
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| Protein GI | 89056267 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0749847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGGC CGGACGGGCT GCGCCTGACA CCCGCGCCGG GCGCCCGGAT CGCCGTGATC
GGTGCGGCGG GGGGCATCGG GCGCGCGACG GTCACAGCAC TGGCCAATGC CGGATGCCGG
GTCTTTGCGC TGGACCGGTC CGACCCACTA TCAACCATGT CGAACAAATG GCCCGATGCG
GTCATACCGA TTGCACTTGA TGCAACAGAC CCTGCCTCAG TCGACGCAGC TTTCTCGCAG
ATCTCAGCCG AAGTGTCCGG GCTTGACGGA CTGGTTCATC TGGCCGGGTT CGCCAATCCA
CGCGCACCTG TTGCCGAAAC CGACCTGGCT GACTGGCGCG AGGTGGTTGA AGGCAATCTC
GACAGCGGTT TCCTGTGTGT CCGCGCCGCG ATCCCCTTGC TGCGCGCGTC TCCCGCATCC
TCCGTGGTTC TGGCAGCCTC GGGCCTCGCC GTGAAACCTG CCCCCGGATA TGGCCCCTAT
GCCGCCGCAA AGGCCGGTCT TCTCGCGTTC ATGCGGGTCC TCGCTGCGGA ACTGGCGCCA
CAGGTGCGCG TCAATGCTGT CGCACCCTCA GCCGTCGAAA CGCCCTTCCT GACCGGAGGC
ACCGGACGCG CGGAGCGATC ACTGGGCTTC GACCGGGACG CCTACGTGCA AAGCGTTCCG
TTGGGCCGCA TGGCGATTGC AGAGGATATC GTTGGGCCCA TCGTATTCCT GCTGGGCCCG
GCCTCGGGCT ATCTGACCGG GCAAACCTTG CACGTGAACG GTGGGTTGGT GATGTCGTGA
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| Protein sequence | MTGPDGLRLT PAPGARIAVI GAAGGIGRAT VTALANAGCR VFALDRSDPL STMSNKWPDA
VIPIALDATD PASVDAAFSQ ISAEVSGLDG LVHLAGFANP RAPVAETDLA DWREVVEGNL
DSGFLCVRAA IPLLRASPAS SVVLAASGLA VKPAPGYGPY AAAKAGLLAF MRVLAAELAP
QVRVNAVAPS AVETPFLTGG TGRAERSLGF DRDAYVQSVP LGRMAIAEDI VGPIVFLLGP
ASGYLTGQTL HVNGGLVMS
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