| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7193 |
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| Symbol | |
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| ID | 8338561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8361756 |
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| End bp | 8362508 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960274 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003117863 |
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| Protein GI | 256396299 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.839106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT CTGAATCTGC GGCTGCGGCT CTGTCCGCAT CCGTGTCCGG CAAGAAGATC
GTGATCATCG GCGGCACCTC CGGTATCGGC TTCGCCCTGG CCCGGCAGGC GGTGGCGGCG
GGTGCGGACG TCGTGATCGC CTCCAGCAAC CAGGACCGCG TCGACGCCGC CACGGAGCGG
CTGGGCGACT CGGCGCAGGG ACGCCGCCTG GACGTCGCCG ACGGCGCGGC CATCGCAGCC
TTCTTCGACG AGATCGGCGA GTTCGACCAC CTCGTCTTCA CCGCGGGCGA ATCCCTGCTC
CTCAAGCCGG TGAGCGATAC CAGCGCGCAG GAGGCGAGGA CCATCTTCGA GCGCCGTTTC
TGGGGCGCGT TCCTGTCCGC CAAGTACGCC GCGCCGCACC TGCGCGAAGG CGGCTCGATC
ACCTTCAGCT CCGGCACCCT CGCGACCCGC CCCGCGGCCG GCACAGCGGT GACCGCCGCC
GTCACCGGTG GTATCGAGTC CCTGAGCCGT GCCCTGGCCG TGGAGCTCGC TCCGCTGCGC
GTGAACGTGA TCCGGCCGGG CGTGATCCGC ACCGAGCTGT GGGACGGCAG CGTCCCGGAC
CCGGACGCCT TCCTTCGGGA GTCCGGCTCC GCACTGCTCA CGCGGCGCGT CGGCACCGCC
GAGGAGGCAG CGGGAGCGTA CCTCTTCGCT CTGTCCAACC CCTACGTCAC CGGCAGCACG
CTCACGATCG ACGGCGGCGG CGTTTTGGTG TGA
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| Protein sequence | MSESESAAAA LSASVSGKKI VIIGGTSGIG FALARQAVAA GADVVIASSN QDRVDAATER
LGDSAQGRRL DVADGAAIAA FFDEIGEFDH LVFTAGESLL LKPVSDTSAQ EARTIFERRF
WGAFLSAKYA APHLREGGSI TFSSGTLATR PAAGTAVTAA VTGGIESLSR ALAVELAPLR
VNVIRPGVIR TELWDGSVPD PDAFLRESGS ALLTRRVGTA EEAAGAYLFA LSNPYVTGST
LTIDGGGVLV
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