| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2624 |
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| Symbol | |
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| ID | 3906297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 3098334 |
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| End bp | 3099053 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879949 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_481715 |
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| Protein GI | 86741315 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0910719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC ACACCGCGCT GGTCGTCGGG GGAACGTCTG GGATCGGGTT GGCCACCGCC
CGGCGGCTGC AAGCCCTTGG CGCAACGGTC CACGTTGTCG GCCGCGGCAA GCAGCGGCTC
GATGACGTCG CGGCCAGCGA CCCGGAGCTG ATCGTCCACC GGGCGGACGG CGGCAACCGT
GCCGAGATCA GCGCCGTCAT CGAGACGATC GGCCGAATCG ACTGGCTGAT CATCAGCCTC
AGTGGCAGCG AAGGTTCGGG ATCTGTCGCT GACCTGGACT TCGACATGCT CCGCCGAGCC
TTCGACGCGA AGTTCTGGGC TCACCTCACC ACCATCCAGG CGGCTGTGCC GCACCTCACA
GCGACCGGCT CCATCACGTT GCTCGGCGCG ATCACCGCCC GCGCCGGAAT GCCAGGAACC
GCAGGCATCG CAGCCCTCAA CGGCGCCGTC GAGGCCCTGG TCAAGCCGCT TGCTATGGAA
CTCGCGCCGA TCCGGGTCAA CGGCGTCTCC CCCGGCCTGG TCGACACCCC CTGGTGGAGT
GGCATACCCG ACGAGGCCCG GAAGGCATAC TTCGCCCAAG CCGCCCAGGC GCTCCCCACC
CAGCGGATCG CGACCGCGGA CGACATCGCC GAGGTCACCG TCGTCGCAGC CACCAACGCC
AACCTCACCG GCACAGTCAT CGAGACCGAC GGCGGGGCCC GTCTCGTGTC GATGGGCTGA
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| Protein sequence | MSEHTALVVG GTSGIGLATA RRLQALGATV HVVGRGKQRL DDVAASDPEL IVHRADGGNR
AEISAVIETI GRIDWLIISL SGSEGSGSVA DLDFDMLRRA FDAKFWAHLT TIQAAVPHLT
ATGSITLLGA ITARAGMPGT AGIAALNGAV EALVKPLAME LAPIRVNGVS PGLVDTPWWS
GIPDEARKAY FAQAAQALPT QRIATADDIA EVTVVAATNA NLTGTVIETD GGARLVSMG
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