| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5682 |
|---|
| Symbol | |
|---|
| ID | 4881379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5933711 |
|---|
| End bp | 5934430 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640143000 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001073936 |
|---|
| Protein GI | 126438245 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCG ACAAGCAGAT CGCGCTGGTG ACCGGCGGGA CATCGGGAAT CGGCCTGGCC
TCGGCGCGGC TGCTGGCCGC CGAGGGTGCC GAGGTCGTCG TCTCCGGACG CGACGCCGAG
CGTGGTGCAC AGGCCGTGGC CGAGATCGGC GGCGCGGTGA GGTTCGTGCA GGCCGATATG
AGCGACCCTC AGTCGGTGAA GGACCTGGCC GAACAGGCCG GAGACGTCGA CATCCTGGTC
AACAACGCGG GGGTGTTTCC CGCCGCGCCG ACGCTGGACC AGGATCTCGC ATCCTTCGAG
ACCATGTTCG ACACGAACGT GCGCGGCGCC TACTTCCTGG TGGCCGAGGT CGCCAGGGGC
ATGGTCGCGC GCGGGCGGGG CGCGATCGTC AACATCACCT CCCCGGCGGG CGACAAGGGC
TTTCCCGGCA CGTCGGCCTA CGGCGCCACG AAGGCCGCGC TGGCCTCGCT GACCCGTACC
TGGGCCGCGG AGTTCGGCGC CAACGGCGTT CGCGTCAACA GTGTCTCGCC GGGTCCGACG
CGCACACCGG GGACCGCCGA CATGGGCGAC TTCATCGACG ACGTCGCCGG GGCACTGCCG
CTGGGCCGCA CCGCGCGCCC CGAGGAGGTC GCTCAGGCGG TGCTGTTCCT GACGTCGCCG
CGGTCGAGTT TCGTGACGGG GTCGACGCTG TACGTCGACG GCGGCGGCTC GGCGGTGTGA
|
|---|
| Protein sequence | MELDKQIALV TGGTSGIGLA SARLLAAEGA EVVVSGRDAE RGAQAVAEIG GAVRFVQADM
SDPQSVKDLA EQAGDVDILV NNAGVFPAAP TLDQDLASFE TMFDTNVRGA YFLVAEVARG
MVARGRGAIV NITSPAGDKG FPGTSAYGAT KAALASLTRT WAAEFGANGV RVNSVSPGPT
RTPGTADMGD FIDDVAGALP LGRTARPEEV AQAVLFLTSP RSSFVTGSTL YVDGGGSAV
|
|---|
| |