| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1392 |
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| Symbol | |
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| ID | 6176445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1544910 |
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| End bp | 1545623 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681147 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001808096 |
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| Protein GI | 172060444 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.663645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC CACTCCACGG AAAGAAAGTA CTTGTCGTCG GCGGCAGCTC GGGAATCGGC
GCCGCGGCCG CGAAAGCCTT CGCGCAACGC GGCGCTGTCG TGACGATCGC ATCGCGCGAC
CCGGCCAGGG CCGGTGCAGA TGTCGCGCCG GACGGGCACG TGCGCACCGA AGCGCTCGAC
ATCACCGATA CGGCGGCCGT CGATGCGTTC TGCGCGCGCG TCGGCCAGTT CGACCACGTC
GTGATTTCGG CCGCGAAGAC AGCCACGGGC CCGCTGCGCG CACTGCCGCT TGCCGACGCG
CAGGCGGCGA TGGACAGCAA GTTCTGGGGC GCATACCGCA TCGCCCGCTC GATCGACATC
GCACCCGGCG GTTCGCTGAC ATTCGTGTCG GGTTACCTCA GCGTGCGGCC GAGCACGTCG
TCGGTGCTGC AGGGTGCGAT CAACGCAGCG CTCGAGGCGC TCGCTCGCGG CCTTGCGCTC
GAACTGGCGC CCGTGCGGGT GAACACCGTG TCGCCGGGTC TGATCGCGAC GCCGCTGTGG
GACAAGCTCG CCCCCGACGT GCGCGATGCG ATGTACGCAG GCGCCGCCCA GCGCCTCCCC
GCACGCCGCG TGGGCCAGCC CGAGGACGTC GCGAACGCGA TCGTCTACCT GGCCACGACG
CCTTACGCGA CCGGTTCGAC GGTGCTGATC GACGGCGGCG GCGCGATCGC GTGA
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| Protein sequence | MNDPLHGKKV LVVGGSSGIG AAAAKAFAQR GAVVTIASRD PARAGADVAP DGHVRTEALD
ITDTAAVDAF CARVGQFDHV VISAAKTATG PLRALPLADA QAAMDSKFWG AYRIARSIDI
APGGSLTFVS GYLSVRPSTS SVLQGAINAA LEALARGLAL ELAPVRVNTV SPGLIATPLW
DKLAPDVRDA MYAGAAQRLP ARRVGQPEDV ANAIVYLATT PYATGSTVLI DGGGAIA
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