Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1542 |
Symbol | |
ID | 4110378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 1677011 |
End bp | 1677781 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638030663 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_638709 |
Protein GI | 108798512 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.694275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAGA AGTCGTATGC CGTCATCGTC GGCGGGGCGT CGGGTATCGG CGCCACCATC GTCCGCGCCA TGGCCGATCG CGGCTACGCG GTGGTCGTCG CCGATCGCAA CATCGACGCG GCGAACGCGC TGGTCGAACA ACTCGGTGCG GGTGGACATA CCGCCGCCGA GGTCGACGTC GTCGACGAAG CAGGCGTGGC AACGCTTTTC GAGTCGGTGG CCGCACTGCC CGGGAGATTC GAGGTCGCGG TCAACTGCGC GGGCATCACC GCGCTCGGCC TGGTCACGGA TCTGCCCGTC AACAAGTTCC GCCGCGTCGT CGACGTGTGC CTGGCCGGCG CGTTCCTCGT CATCCAGCAT GCCGGCAGGC ACCTCGCCGA CGGCGGCACG ATCATCTCGC TGAGCTCACT CAACGCCCGG CAGCCCGCGG TCGGCATGAG CGCCTACAGT TCCGCCAAGG CCGGGCTGTC GATGCTGACC CAGGTGGCCG CACTGGAACT CGCCCCGCGG CTCCGAGTCA ACGCGGTGGC GCCCGGGCTG GTGCGAACCC CGTTGACCTC CGGAGCGTTG GGCGTGCCCG GCGTGGAGGA CGAGTACGTC GAGAACATCC CACTGGGCCG GCCCGGTACG CCGGAGGAGA TCGCGGATGC GGTGATGTAC CTGGCCACCG CCGAGTGGAT CACCGGCGAA GTGCTCGACC TCAACGGCGG CGCGCATCTG ATGCGCTACC CGAACGTGCA CGCCCACTTC GAACAGGCCC GCACCCGGTG A
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Protein sequence | MSEKSYAVIV GGASGIGATI VRAMADRGYA VVVADRNIDA ANALVEQLGA GGHTAAEVDV VDEAGVATLF ESVAALPGRF EVAVNCAGIT ALGLVTDLPV NKFRRVVDVC LAGAFLVIQH AGRHLADGGT IISLSSLNAR QPAVGMSAYS SAKAGLSMLT QVAALELAPR LRVNAVAPGL VRTPLTSGAL GVPGVEDEYV ENIPLGRPGT PEEIADAVMY LATAEWITGE VLDLNGGAHL MRYPNVHAHF EQARTR
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