Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0159 |
Symbol | |
ID | 8881336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 162787 |
End bp | 163548 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003508972 |
Protein GI | 291297694 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.501988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAC GTTTCGCGGG CAAGACCGTC CTGATCACCG GCGGCGGTTC CGGCATCGGC CGCGAGGCCG CGCGCGCCTT CGCCGCCGAG GGCGCCACCG TCGTGGTCGC CGGACGGCGC GAGGCGCCGC TGAAGGAGAC CGTCGAACTC GTCACCGCCG AGGGCGGCAC CGCCAGCTTC GTCACCGGCG ACGTCACCAA CGAGGAGGAC GTGCGCCGGA TCGTCGCCAC CGTCGCCGAA CGGCACTCCC GGCTCGACGT GGCGGTCAAC AACGCCGGGG TGTTCGCCGC CGGACCACTC GCCGAGTTCG AGCTCGACCA GTGGCAGCGA CTCGTCGACA TCAACGTCAC CGGGGTGCTG CTGTCCATGA AACACGAACT GCGGCAACTG AAGCAGCAGG ACGGCGGCGG CGCGATCATC AACGTCGGCT CGACCGTCGG CGCCCACAAG TCCGTGCCCG GCCTGGCCGC CTACGGTGCC AGCAAGGCCG CGGTCTCGGC ACTGAGCCGG GCCGCCGCCG CGGAGAACAT CCGCGACGGG ATCCGCATCA ACATCGTCAG CCCCGGCTCC TCCGACACCC CGATGTCGAT GCGGGGCGGC GAAACCGAGC AGCAGCGGGC CGAACGGCTG CACGAGACCG TCCCCTTGGG ACGGGTCGGT CAGCTCGACG AGGTGGTCTC GGCGGTGCTG TGGCTGGCCT CGGAGGGTTC CGGCTTCGCC GTCGGGCACG ACCTGGTCGT CGACGGCGGC GTGAGCCTGT AG
|
Protein sequence | MSTRFAGKTV LITGGGSGIG REAARAFAAE GATVVVAGRR EAPLKETVEL VTAEGGTASF VTGDVTNEED VRRIVATVAE RHSRLDVAVN NAGVFAAGPL AEFELDQWQR LVDINVTGVL LSMKHELRQL KQQDGGGAII NVGSTVGAHK SVPGLAAYGA SKAAVSALSR AAAAENIRDG IRINIVSPGS SDTPMSMRGG ETEQQRAERL HETVPLGRVG QLDEVVSAVL WLASEGSGFA VGHDLVVDGG VSL
|
| |