Gene Snas_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0159 
Symbol 
ID8881336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp162787 
End bp163548 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003508972 
Protein GI291297694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.501988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC GTTTCGCGGG CAAGACCGTC CTGATCACCG GCGGCGGTTC CGGCATCGGC 
CGCGAGGCCG CGCGCGCCTT CGCCGCCGAG GGCGCCACCG TCGTGGTCGC CGGACGGCGC
GAGGCGCCGC TGAAGGAGAC CGTCGAACTC GTCACCGCCG AGGGCGGCAC CGCCAGCTTC
GTCACCGGCG ACGTCACCAA CGAGGAGGAC GTGCGCCGGA TCGTCGCCAC CGTCGCCGAA
CGGCACTCCC GGCTCGACGT GGCGGTCAAC AACGCCGGGG TGTTCGCCGC CGGACCACTC
GCCGAGTTCG AGCTCGACCA GTGGCAGCGA CTCGTCGACA TCAACGTCAC CGGGGTGCTG
CTGTCCATGA AACACGAACT GCGGCAACTG AAGCAGCAGG ACGGCGGCGG CGCGATCATC
AACGTCGGCT CGACCGTCGG CGCCCACAAG TCCGTGCCCG GCCTGGCCGC CTACGGTGCC
AGCAAGGCCG CGGTCTCGGC ACTGAGCCGG GCCGCCGCCG CGGAGAACAT CCGCGACGGG
ATCCGCATCA ACATCGTCAG CCCCGGCTCC TCCGACACCC CGATGTCGAT GCGGGGCGGC
GAAACCGAGC AGCAGCGGGC CGAACGGCTG CACGAGACCG TCCCCTTGGG ACGGGTCGGT
CAGCTCGACG AGGTGGTCTC GGCGGTGCTG TGGCTGGCCT CGGAGGGTTC CGGCTTCGCC
GTCGGGCACG ACCTGGTCGT CGACGGCGGC GTGAGCCTGT AG
 
Protein sequence
MSTRFAGKTV LITGGGSGIG REAARAFAAE GATVVVAGRR EAPLKETVEL VTAEGGTASF 
VTGDVTNEED VRRIVATVAE RHSRLDVAVN NAGVFAAGPL AEFELDQWQR LVDINVTGVL
LSMKHELRQL KQQDGGGAII NVGSTVGAHK SVPGLAAYGA SKAAVSALSR AAAAENIRDG
IRINIVSPGS SDTPMSMRGG ETEQQRAERL HETVPLGRVG QLDEVVSAVL WLASEGSGFA
VGHDLVVDGG VSL