| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4739 |
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| Symbol | |
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| ID | 4313631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1732950 |
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| End bp | 1733687 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152583 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776623 |
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| Protein GI | 115359485 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.93473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.931681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG ATTTCGCCGC CCGTTCACTC GATAACAAGT CCGTCCTCAT CATTGGCGGA
ACCTCCGGCA TTGGCCTTTC CGCGGCCAAA CAAGCGAAGG CCGCCGGGGC GAACGTCACC
GTGATCGGCT TCAACGCGGA GGGCGCCGAA CGCGTCGCCG CCGAGAATGG TTTCGCGGGT
TGGCGCGCCG CCGACGTGAC CAAGCCGGAG ACCCTCACCG CGGCGCTGGC CGACATCGCA
CACGTCGACC ATCTCGTCCT CCTCGCCGGG ACCTTCGTGG CAGGCAAGGT GCTGGAAGCG
GATGTCGACT ATCTGCGTCG GGCGTTCGAC GAACGTGTGT GGGCAGCCGT GCACACGTTG
CGCACGCTCG GTGACCGCCT GGCCGCCGAT GGCTCCATCA CGTTCATTTC AGGCGTGCTG
GCCGACCGGC CCAATGCGTA CGGCACGGCC ATTCTTGCGT CGGCGTCCGC CGCGATGGAA
GCGCTGGCCC GTGGTTTGGT GCTTGAACTG GCGCCGCGCC GCGTCAACAC CGTTTCGCCC
GGCACCACCG ACACGCCGCT GCTTGCCCGC ACGCTCGGCG ACGGTCGCGA CGCATACGTG
AACGCATTGA AAGAAAAATT GCCGCTGCAT CGTTTGGGTA CCGCCGACGA AGTGGGCGCC
GCGGTGGTGT TCCTGATGAG CAACGGTTTC ATGAACGGCG AGACGATCCA CATCGACGGC
GGCGCCCGTC TCGTGTGA
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| Protein sequence | MTTDFAARSL DNKSVLIIGG TSGIGLSAAK QAKAAGANVT VIGFNAEGAE RVAAENGFAG
WRAADVTKPE TLTAALADIA HVDHLVLLAG TFVAGKVLEA DVDYLRRAFD ERVWAAVHTL
RTLGDRLAAD GSITFISGVL ADRPNAYGTA ILASASAAME ALARGLVLEL APRRVNTVSP
GTTDTPLLAR TLGDGRDAYV NALKEKLPLH RLGTADEVGA AVVFLMSNGF MNGETIHIDG
GARLV
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