| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_1727 |
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| Symbol | |
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| ID | 4899549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 1685431 |
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| End bp | 1686153 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640134957 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001065998 |
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| Protein GI | 126454594 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.169393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCTT CTTTCAACGA TCAGCGCGTC CTCGTCATCG GCGGCAGTTC CGGGATCGGC
GCCGCGGCCG CCCGCGCGTT CGCCGTGCTG GACGCCGACG TGACGATCGC GTCGCGCGAC
GCGAACAAGC TCGCGGCCGC CGCACGGGCG ATCGACGGCC CGCGCCCGGT TCGGCAAGCG
GTGCTCGATA CGACGGATGC GCCCGCGGTC GACGCCTTCT TCGCCGAGGC CGGCCCGTTC
GACCACGTCG TCATGTCGGC CGCGCACACG CCCGGCGGGC CCGTGCGCAA GCTGCCGCTC
GCCGACGCGC AGGCGGCGAT GGACAGCAAG TTCTGGGGCG CATACCGCGT CGCGCGCGCG
GCGCGCATCG CGCCGGGCGG GTCGCTCACG TTCGTCTCCG GCTTCCTGAG CGTGCGGCCG
AGCGCGAGCG CGGTGCTGCA AGGCGCGATC AACGCGGCGC TCGAGGCGCT TGCGCGCGGG
CTCGCGCTCG AGCTCGCGCC GGTGCGCGTG AACACCGTGT CGCCGGGGCT CGTCGCGACG
CCGCTGTGGT CGAAGCTCGA CGACGCGGCG CGCGAAGCGA TGTACGCGTC GGCGGCCGCG
CGGCTGCCCG CGCGGCGCGT CGGGCAGCCC GAGGACGTCG CGAACGCGAT CGTCTACCTC
GCGGCGACGC GTTACGCGAC GGGGTCGACG GTGCTCGTGG ACGGCGGCGG CGCGATCGCG
TGA
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| Protein sequence | MQASFNDQRV LVIGGSSGIG AAAARAFAVL DADVTIASRD ANKLAAAARA IDGPRPVRQA
VLDTTDAPAV DAFFAEAGPF DHVVMSAAHT PGGPVRKLPL ADAQAAMDSK FWGAYRVARA
ARIAPGGSLT FVSGFLSVRP SASAVLQGAI NAALEALARG LALELAPVRV NTVSPGLVAT
PLWSKLDDAA REAMYASAAA RLPARRVGQP EDVANAIVYL AATRYATGST VLVDGGGAIA
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