Gene Rmet_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4327 
Symbol 
ID4041185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp921184 
End bp921606 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID637979748 
Productputative short chain dehydrogenase 
Protein accessionYP_586461 
Protein GI94313252 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGCTC AGCAACAAGG GACTACTACG GGTCGGTCAG GCACTGTCAT TGGGAGAAGC 
TGCGAAGCGT GCTCGTATCG ACCGGTCCGT CGAACCATTC TGCGTTCACT GGCTGAAGGC
GCCGCGTACA AGGCCAACGC AGGAGCCAGC ATCGTGGCGG CGCTCGACGG ACTGGCGCGA
ACGCTGGCCG TGGAGCTGGC ACCGATTCGC GTCAACGTCG TCTCCCCGGG CGTGGTCGAT
TCCCCGACCT GGGACTTTCT GCCGTCCGAC GCGCGCGCCA GTGTGCTACA CGGCATCGGC
GCGGGTCTTC CGGTCGGTCG CGTGGGTACT GCATCGGAAC TCGCCCAGGC GGGCCGCTTC
CTGATTGCCA ACGGCTTCGC AACCGGCACC GTCCTGCAGA TCGACGGCGG TGATGTGGAG
TGA
 
Protein sequence
MPAQQQGTTT GRSGTVIGRS CEACSYRPVR RTILRSLAEG AAYKANAGAS IVAALDGLAR 
TLAVELAPIR VNVVSPGVVD SPTWDFLPSD ARASVLHGIG AGLPVGRVGT ASELAQAGRF
LIANGFATGT VLQIDGGDVE