Gene Aboo_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0217 
Symbol 
ID8827158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp224595 
End bp225317 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content41% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003482591 
Protein GI289595895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG TAATAGTTAC AGGAGCCTCA AGGGGCATAG GGAGGGCAAT AGCAATTGAA 
CTAGCCAAAA GAGGATACAG AGTAGGAATA AACTATAATA AATCAGAAAA AGAGGCAAGA
GAGCTTGCAA ATCTTATAAA TGAGAAATAC GGTGAGGCGC ATCCATATAA GGCAGATGTT
AGCTCATATC AAGAGATTAA GAATATGGTT GATTCCTTTC ACAATGATTT TGGGGAGATA
TACGGGCTCG TGGCAAACGC TGGAATTTAC ATAAGAAAGA GAATGAGGGA GATGACCATA
GAGGACTGGA AAAGAACAAT AGATGTGAAT TTAAACGGAG CATTTTATCT CGTAAAGGCG
TCCTTGCCTT ACATATCCTA TGGCTCGATA GTTTTCATTG CATCTCAGCT TGCCTTCAAA
GGGTCTGAAA GTAGCGTAGC TTATGGAGCA TCCAAAGCAG GAATTTTAGG ATTAATGCGT
TCTCTCGCAC TTCAACTAGC TCCAGATATC CGGGTAAATG CGGTTGCTCC TGGCACAATT
GATACGGATA TGATATCCAC ATACACCCCT AAGCAAAGGA GGGAGAGAGA AGAGAAGATA
CCATTAAAGA GAATTGGCAA ACCGAACGAG GTAGCAAAAG TCGTTGCCTT CCTGCTAAGC
GAAGATTCCT CATACATAAC AGGAGCTACC ATTGATGTGA ATGGAGGACT CTACATAAGA
TGA
 
Protein sequence
MKNVIVTGAS RGIGRAIAIE LAKRGYRVGI NYNKSEKEAR ELANLINEKY GEAHPYKADV 
SSYQEIKNMV DSFHNDFGEI YGLVANAGIY IRKRMREMTI EDWKRTIDVN LNGAFYLVKA
SLPYISYGSI VFIASQLAFK GSESSVAYGA SKAGILGLMR SLALQLAPDI RVNAVAPGTI
DTDMISTYTP KQRREREEKI PLKRIGKPNE VAKVVAFLLS EDSSYITGAT IDVNGGLYIR