Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0217 |
Symbol | |
ID | 8827158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 224595 |
End bp | 225317 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003482591 |
Protein GI | 289595895 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG TAATAGTTAC AGGAGCCTCA AGGGGCATAG GGAGGGCAAT AGCAATTGAA CTAGCCAAAA GAGGATACAG AGTAGGAATA AACTATAATA AATCAGAAAA AGAGGCAAGA GAGCTTGCAA ATCTTATAAA TGAGAAATAC GGTGAGGCGC ATCCATATAA GGCAGATGTT AGCTCATATC AAGAGATTAA GAATATGGTT GATTCCTTTC ACAATGATTT TGGGGAGATA TACGGGCTCG TGGCAAACGC TGGAATTTAC ATAAGAAAGA GAATGAGGGA GATGACCATA GAGGACTGGA AAAGAACAAT AGATGTGAAT TTAAACGGAG CATTTTATCT CGTAAAGGCG TCCTTGCCTT ACATATCCTA TGGCTCGATA GTTTTCATTG CATCTCAGCT TGCCTTCAAA GGGTCTGAAA GTAGCGTAGC TTATGGAGCA TCCAAAGCAG GAATTTTAGG ATTAATGCGT TCTCTCGCAC TTCAACTAGC TCCAGATATC CGGGTAAATG CGGTTGCTCC TGGCACAATT GATACGGATA TGATATCCAC ATACACCCCT AAGCAAAGGA GGGAGAGAGA AGAGAAGATA CCATTAAAGA GAATTGGCAA ACCGAACGAG GTAGCAAAAG TCGTTGCCTT CCTGCTAAGC GAAGATTCCT CATACATAAC AGGAGCTACC ATTGATGTGA ATGGAGGACT CTACATAAGA TGA
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Protein sequence | MKNVIVTGAS RGIGRAIAIE LAKRGYRVGI NYNKSEKEAR ELANLINEKY GEAHPYKADV SSYQEIKNMV DSFHNDFGEI YGLVANAGIY IRKRMREMTI EDWKRTIDVN LNGAFYLVKA SLPYISYGSI VFIASQLAFK GSESSVAYGA SKAGILGLMR SLALQLAPDI RVNAVAPGTI DTDMISTYTP KQRREREEKI PLKRIGKPNE VAKVVAFLLS EDSSYITGAT IDVNGGLYIR
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