| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1941 |
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| Symbol | |
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| ID | 8225512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2372672 |
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| End bp | 2373448 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644929779 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003086331 |
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| Protein GI | 255035710 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.663609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACTT TGAAAGATAA GGTGGCGGTT GTGACCGGGG GAAACCGGGG AATCGGATAC
AGCACCGCTC AAATTTTGGC CGAGGCAGGT GCGAAAGTGG TTATTACCGG TCGTGACAAA
GAATCCGTTA ACAATGCTTC CGCAGAGTTG GGGGTCAAAG GCTTTATCGC CGACCAAAGA
AAACTTGAAA CGCTCGATGA GCTTGCAAAA AGCCTGGAAG ATCAGGTTGG CAAAATAGAT
GTGCTTTTTC TTAACGCTGG GTTAGGGACT TTTCAACCCG TGAGCTCAAC GCCCGAGGAC
GTGTATGATC TGATCATGGA CACAAATCTG AAAGGGACAT TTTTTACCGT TCAAAAATTG
ATACCCTTGT TAAATGATGG CGCTTCGGTC ATTTTCAATG CGTCCGTGAC ACCAATATTG
GGCATTCCCG GTTCAAGTGT TTACGCGGCA AGCAACGCAG CCATTGTTTC CCTTGCCCGG
ATTTTATCTA AAGAGCTTTC CGATCGAAAA ATAAGAGTAA ACACTGTTTC TCCCGGCACG
ATCAGGGCAG GCGTACACAC ACCATCAGAA GAAGAACAAA AAAAGAACCT AATGCCCTCT
GAAAAGCGCA GCGCTTTTGA AAACGCATTA GAAAGAAGGA TGCTGTTAAA GCGGTATGGC
ACAGCCTGTG AAGTTGGTAA TGCAGTCAAA TTCCTCGCAT CCGACGAATC TAGCTTCGTA
AATGGTTCTG TTCTGACCGT TGACGGCGGA GTTACTGTCG ATTCGCTCAA TTACTAA
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| Protein sequence | MKTLKDKVAV VTGGNRGIGY STAQILAEAG AKVVITGRDK ESVNNASAEL GVKGFIADQR
KLETLDELAK SLEDQVGKID VLFLNAGLGT FQPVSSTPED VYDLIMDTNL KGTFFTVQKL
IPLLNDGASV IFNASVTPIL GIPGSSVYAA SNAAIVSLAR ILSKELSDRK IRVNTVSPGT
IRAGVHTPSE EEQKKNLMPS EKRSAFENAL ERRMLLKRYG TACEVGNAVK FLASDESSFV
NGSVLTVDGG VTVDSLNY
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