| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4605 |
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| Symbol | |
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| ID | 8360778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5745339 |
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| End bp | 5746106 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966759 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124247 |
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| Protein GI | 256423594 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.350123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA AGAATAAGGT AGCAGTTATC ACGGGAGGCA ATAGCGGTAT AGGGTTTGGC
ATTGCGGAGG CATTCAGGAA CGAAGGCGCA TCAGGTACCA TCGTAGGTAG AAACCAGGAA
ACACTCGATC GCTCAGTAAC AGCGTTAGGG AGTGATTTCA TCGGGATCAA TGCCGATGTA
ACAAAGTTTG AAGACCTGGA GCGTATATTT AAAAATACAG CTGAAAAGTT TGGTCTGATA
GATACGATTG TGGTAAACGC AGGCGGCGCG GTAGAAGGCG CTCAGATGGC CTCTATCGCT
GTTACCACGG AATCGGATTA TGACCATTAT ATGAACCTCA ATCTGAAGAG CGTTTATTTC
ACCATCCAGA AAGCATTGCC TTACCTGAAA GACGGCGCTT CGATCGTATT GATCGGTTCT
ATCGCCGGAC ACAGAGCATT TCCGGGTCAG TCAGTGTATG CAGCCGCCAA GGCAGCTGTG
ATTTCCTTTG CACGTGGATT CTCGCTCGAT CTGCTGGACA GAAAGATCAG GGTCAATGTA
CTTTCTCCGG GAACAATAGA TACGCCTGTG TTTGGTAAAT TCCTGGCGCC TGAACATATT
GACCATGTAA AAAATTTGTG GGTAGATATC ATTCCGGCAG GCAGAATCGG ACAACCTTCA
GATATTGGCA ACGCCGCCGT ATTCCTGGCT TCAGATGAAT CGTCTTTTGT AGTAGGAACC
GAGATCATAT CCGATGGTGG TGCACTGAGT ATGACCATCC TGAAATAG
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| Protein sequence | MKLKNKVAVI TGGNSGIGFG IAEAFRNEGA SGTIVGRNQE TLDRSVTALG SDFIGINADV
TKFEDLERIF KNTAEKFGLI DTIVVNAGGA VEGAQMASIA VTTESDYDHY MNLNLKSVYF
TIQKALPYLK DGASIVLIGS IAGHRAFPGQ SVYAAAKAAV ISFARGFSLD LLDRKIRVNV
LSPGTIDTPV FGKFLAPEHI DHVKNLWVDI IPAGRIGQPS DIGNAAVFLA SDESSFVVGT
EIISDGGALS MTILK
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