Gene CA2559_11298 details

Gene Information

• Locus tag: CA2559_11298
• ID: 9297747
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2455128
• End bp: 2455826
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 35%
• Product: short chain dehydrogenase
• Protein accession: YP_003717001
• Protein GI: 298208822

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAAGA ATATTTTATT AATTGGTGGC TCAAAAGGAA TTGGTTTAAG TATAACTGAA 
CTATTGCAGG ACGACCACAA CCTTTTTGTT GCATCTAGAA CTACAGGTGA ATTAGACACC 
TCTTTAGTTA CCCATTTAGA GTTTGATGTA CAAAAGGATG ACATCACTTC ATTAAATTTA 
CCAGATCAAA TAGATGGTTT GGTATTCTGT CCTGGCAGTA TAAACCTTAA GCCATTTAAA 
ATGCTGAAAC CTTCAGATTT TGAAGAAGAC ATAAACATTA ACTTTATGTC TTTAGTCAAA 
ACTGTTCATG CATTGTTACC AAAGCTAAAA AAGAGTGAGC AAGCTAGTCT TGTATTTTTT 
AGTACTGTTG CTGTAAAAGT AGGAATGCCA TTTCATACCA GTGTAGCTGC CGCAAAAGGC 
GCAATCGAAG GTTTTGCAAA AGCATTAGCT GCAGAGTATG CACCAACATT TAGAGTAAAT 
GTAATAGCAC CATCACTCAC AGATACACCA CTAGCCGCTC AACTTCTTAA TAATGACAAG 
AAACGAGAAA AAATGAATGA TAGGCATCCT CTAAAACGCG TAGGAACAAC TGAAGATATA 
GCTGCAATAG CAAAGTTTCT TCTCACAGAT CAAAGTGCTT GGATTACAGG TCAAGTTTTT 
GGAGTTGATG GAGGTATGAG TACTTTAAAC ATTAATTAA 

 

Protein sequence

MKKNILLIGG SKGIGLSITE LLQDDHNLFV ASRTTGELDT SLVTHLEFDV QKDDITSLNL 
PDQIDGLVFC PGSINLKPFK MLKPSDFEED ININFMSLVK TVHALLPKLK KSEQASLVFF 
STVAVKVGMP FHTSVAAAKG AIEGFAKALA AEYAPTFRVN VIAPSLTDTP LAAQLLNNDK 
KREKMNDRHP LKRVGTTEDI AAIAKFLLTD QSAWITGQVF GVDGGMSTLN IN