| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3821 |
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| Symbol | |
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| ID | 3369356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4545901 |
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| End bp | 4546635 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654178 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_236889 |
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| Protein GI | 66047048 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00400497 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCGACA AGAAAAAGCT TTTGCTGACT GGCGCAAGCC GGGGTATCGG TCATGCCACG
GTCAAGCATT TCAATGCCGC TGGCTGGGAG GTGTTTACCG CGTCGCGGCA GAACTGGGTC
GATGACTGCC CGTGGGCTGA AGGTCTGCTC AACCACATTC ACCTGGACCT GGAAAACATC
GACAGCGTCA GCGAGAGCAT GGCGGCGATC AAGGACAAGC TCGGCGGGCG GCTCGATGCG
CTGGTCAACA ATGCCGGCGT TTCACCGAAG ACCGAGGACG GCGGGCGCAT GGGTGTGCTG
GAGTCGGATT ACAGCACCTG GATCAAGGTG TTCAACGTCA ATCTGTTCTC CACCGCGCTG
CTGGGTCGGG GTTTGTTTGA CGAGTTGAAG GCGGCCAAGG GCAGCATCAT CAATGTCACC
TCGATCGCCG GCTCGAAGGT TCACCCGTTT GCGGGGGTCG CCTACGCCAC GTCCAAGGCG
GCACTGTCGG CGCTGACCCG GGAAATGGCC TTCGATTTCG GTCCGCACGG GATACGGGTC
AATGCCATTG CGCCGGGTGA AATCGATACG TCGATTCTGT CACCCGGCAC CGCCGAGATT
GTCGAGCGGC TGGTGCCGAT GCACCGGCTG GGCAAGCCCG AGGAAGTCGC CTCGCTGATC
TACTTCCTGT GTACGGCTGG CGCGTCCTAC GTGAACGGTG CGGAGATTCA CGTCAACGGC
GGCCAGCACG TCTGA
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| Protein sequence | MGDKKKLLLT GASRGIGHAT VKHFNAAGWE VFTASRQNWV DDCPWAEGLL NHIHLDLENI
DSVSESMAAI KDKLGGRLDA LVNNAGVSPK TEDGGRMGVL ESDYSTWIKV FNVNLFSTAL
LGRGLFDELK AAKGSIINVT SIAGSKVHPF AGVAYATSKA ALSALTREMA FDFGPHGIRV
NAIAPGEIDT SILSPGTAEI VERLVPMHRL GKPEEVASLI YFLCTAGASY VNGAEIHVNG
GQHV
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