Gene Mkms_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1565 
Symbol 
ID4614034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1681170 
End bp1681940 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID639791238 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_937564 
Protein GI119867612 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGA AGTCGTATGC CGTCATCGTC GGCGGGGCGT CGGGTATCGG CGCCACCATC 
GTCCGCGCCA TGGCCGATCG CGGCTACGCG GTGGTCGTCG CCGATCGCAA CATCGACGCG
GCGAACGCGC TGGTCGAACA ACTCGGTGCG GGTGGACATA CCGCCGCCGA GGTCGACGTC
GTCGACGAAG CAGGCGTGGC AACGCTTTTC GAGTCGGTGG CCGCACTGCC CGGGAGATTC
GAGGTCGCGG TCAACTGCGC GGGCATCACC GCGCTCGGCC TGGTCACGGA TCTGCCCGTC
AACAAGTTCC GCCGCGTCGT CGACGTGTGC CTGGCCGGCG CGTTCCTCGT CATCCAGCAT
GCCGGCAGGC ACCTCGCCGA CGGCGGCACG ATCATCTCGC TGAGCTCACT CAACGCCCGG
CAGCCCGCGG TCGGCATGAG CGCCTACAGT TCCGCCAAGG CCGGGCTGTC GATGCTGACC
CAGGTGGCCG CACTGGAACT CGCCCCGCGG CTCCGAGTCA ACGCGGTGGC GCCCGGGCTG
GTGCGAACCC CGTTGACCTC CGGAGCGTTG GGCGTGCCCG GCGTGGAGGA CGAGTACGTC
GAGAACATCC CACTGGGCCG GCCCGGTACG CCGGAGGAGA TCGCGGATGC GGTGATGTAC
CTGGCCACCG CCGAGTGGAT CACCGGCGAA GTGCTCGACC TCAACGGCGG CGCGCATCTG
ATGCGCTACC CGAACGTGCA CGCCCACTTC GAACAGGCCC GCACCCGGTG A
 
Protein sequence
MSEKSYAVIV GGASGIGATI VRAMADRGYA VVVADRNIDA ANALVEQLGA GGHTAAEVDV 
VDEAGVATLF ESVAALPGRF EVAVNCAGIT ALGLVTDLPV NKFRRVVDVC LAGAFLVIQH
AGRHLADGGT IISLSSLNAR QPAVGMSAYS SAKAGLSMLT QVAALELAPR LRVNAVAPGL
VRTPLTSGAL GVPGVEDEYV ENIPLGRPGT PEEIADAVMY LATAEWITGE VLDLNGGAHL
MRYPNVHAHF EQARTR