| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1880 |
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| Symbol | |
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| ID | 3688349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2050552 |
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| End bp | 2051364 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637728336 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_333281 |
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| Protein GI | 76810992 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0386097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGCG CAGCCCGCTC ACGCTGCGCG AACCCGAAAC CCTCTGACGG CGGCACCGCC
TTCAACCCTT TTCGTTCAGG CAATCACACC ATGCAGGCTT CTTTCAACGA TCAGCGCGTC
CTCGTCATCG GCGGCAGTTC CGGGATCGGC GCCGCGGCCG CCCGCGCGTT CGCCGTGCTG
GACGCCGACG TGACGATCGC ATCGCGCGAC GCGAACAAGC TCGCGGGCGC CGCACGGGCG
ATCGACGGCC CGCGCCCGGT TCGGCAAGCG GTGCTCGATA CGACGGATGC GCCCGCGGTC
GACGCCTTCT TCGCCGAGGC CGGCCCGTTC GACCACGTCG TCATGTCGGC CGCGCACACG
CCCGGCGGGC CCGTGCGCAA GCTGCCGCTC GCCGACGCGC AGGCGGCGAT GGACAGCAAG
TTCTGGGGCG CATACCGCGT CGCGCGCGCG GCGCGCATCG CGCCGGGCGG GTCGCTCACG
TTCGTCTCCG GCTTCCTGAG CGTGCGGCCG AGCGCGAGCG CGGTGCTGCA AGGCGCGATC
AACGCGGCGC TCGAGGCGCT TGCGCGCGGG CTCGCGCTCG AGCTCGCGCC GGTGCGCGTG
AACACCGTGT CGCCGGGGCT CGTCGCGACG CCGCTGTGGT CGAAGCTCGA CGACGCGGCG
CGCGAAGCGA TGTACGCGTC GGCGGCCGCG CGGCTGCCCG CGCGGCGCGT CGGGCAGCCC
GAGGACATCG CGAACGCGAT CGTCTACCTC GCGGCGACGC GTTACGCGAC GGGGTCGACC
GTGCTCGTGG ACGGCGGCGG CGCGATCGCG TGA
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| Protein sequence | MHGAARSRCA NPKPSDGGTA FNPFRSGNHT MQASFNDQRV LVIGGSSGIG AAAARAFAVL
DADVTIASRD ANKLAGAARA IDGPRPVRQA VLDTTDAPAV DAFFAEAGPF DHVVMSAAHT
PGGPVRKLPL ADAQAAMDSK FWGAYRVARA ARIAPGGSLT FVSGFLSVRP SASAVLQGAI
NAALEALARG LALELAPVRV NTVSPGLVAT PLWSKLDDAA REAMYASAAA RLPARRVGQP
EDIANAIVYL AATRYATGST VLVDGGGAIA
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