Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0985 |
Symbol | |
ID | 4090929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1076601 |
End bp | 1077314 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638014256 |
Product | short chain dehydrogenase |
Protein accession | YP_620867 |
Protein GI | 107022540 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATC CGCTCCACGG AAAGACAGTA CTCGTCGTCG GCGGCAGCTC CGGCATCGGC GCCGCCACCG CAGCGGCATT CGCGCGGCGC GGCGCGCGGG TGACGATCGC TTCGCGCGAT CCACGCAGGT TCGACATCGA CGCCCTGCCG GGCGCGGACG TGCGGACCGA AACGCTCGAC ATCACCGATA CGGCGGACGT CGATGCGTTC TGCGCACGCG CCGGCCGGTT CGACCACGTC GTGATTTCTG CCGCGAAGAC GGCCACGGGC GCGGTCCGTG CGCTGCCGCT CGCCGACGCG CAGGCAGCGA TGGACAGCAA GTTCTGGGGC GCCTACCGCA TCGCCCGCGC GATCGATATC GCGCCCGGCG GCTCGCTGAC GTTCGTGTCG GGCTACCTGA GCGTACGGCC GAGCGCGTCG TCGGTGCTGC AAGGCGCGAT CAACGCAGCG CTCGAAGCCC TCGCCCGCGG GCTGGCGCTC GAGCTGGCGC CGGTGCGCGT GAATACCGTG TCGCCCGGCC TGATCGCGAC GCCGCTGTGG GACAAGCTCG CGCCCGACGC ACGTGACGCG ATGTACGCCG GCGCCGCCCA GCGGCTTCCG GCACGCAGGG TCGGCCAGCC GGAGGATGTC GCGAATGCGA TCCTATATCT GGCGGCCACG CCCTACGCAA CCGGCTCGAC GGTGCTGATC GACGGCGGCG GCGCGATTGC GTGA
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Protein sequence | MDDPLHGKTV LVVGGSSGIG AATAAAFARR GARVTIASRD PRRFDIDALP GADVRTETLD ITDTADVDAF CARAGRFDHV VISAAKTATG AVRALPLADA QAAMDSKFWG AYRIARAIDI APGGSLTFVS GYLSVRPSAS SVLQGAINAA LEALARGLAL ELAPVRVNTV SPGLIATPLW DKLAPDARDA MYAGAAQRLP ARRVGQPEDV ANAILYLAAT PYATGSTVLI DGGGAIA
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